def wr_xlsx(self, fout_xlsx, goids, sortby=None, **kws_usr):
"""Write goids into a table."""
nts = GoSubDag(goids, self.go2obj).get_nts(goids, sortby)
kws_wr = kws_usr.copy()
if 'fld2col_widths' not in kws_wr:
kws_wr['fld2col_widths'] = self.fld2col_widths
wr_xlsx_tbl(fout_xlsx, nts, **kws_wr)
def wr_xlsx(self, fout_xlsx, goids, sortby=None, **kws_usr):
"""Write goids into a table."""
nts = GoSubDag(goids, self.go2obj).get_nts(goids, sortby)
kws_wr = kws_usr.copy()
if 'fld2col_widths' not in kws_wr:
kws_wr['fld2col_widths'] = self.fld2col_widths
wr_xlsx_tbl(fout_xlsx, nts, **kws_wr)
def wr_xlsx(self, fout_xlsx="gos_depth01.xlsx", **kws):
"""Write xlsx table of depth-01 GO terms and their letter representation."""
data_nts = self.get_d1nts()
if 'fld2col_widths' not in kws:
kws['fld2col_widths'] = {'D1': 6, 'NS':3, 'depth': 5, 'GO': 12, 'name': 40}
if 'hdrs' not in kws:
kws['hdrs'] = self.hdrs
wr_xlsx_tbl(fout_xlsx, data_nts, **kws)
def wr_xlsx(self, fout_xlsx="gos_depth01.xlsx", **kws):
"""Write xlsx table of depth-01 GO terms and their letter representation."""
data_nts = self.get_d1nts()
if 'fld2col_widths' not in kws:
kws['fld2col_widths'] = {'D1': 6, 'NS':3, 'depth': 5, 'GO': 12, 'name': 40}
if 'hdrs' not in kws:
kws['hdrs'] = self.hdrs
wr_xlsx_tbl(fout_xlsx, data_nts, **kws)