# sanity checks
if not os.path.isdir(maindir):
print(('ERROR: directory', maindir, 'does not exists.'))
sys.exit(0)
if os.path.isfile(output):
print(('ERROR: file', output,
'exists, delete or provide a new filename.'))
sys.exit(0)
# start time
t1 = time.time()
# get all h5 files
allh5 = get_all_files(maindir, ext='.h5')
print(('found', len(allh5), 'H5 files.'))
# create summary file
HDF5.create_aggregate_file(output,
expectedrows=len(allh5),
summaryfile=True)
print('Summary file created, we start filling it.')
# fill it
h5 = HDF5.open_h5_file_append(output)
HDF5.fill_hdf5_aggregate_file(h5, allh5, summaryfile=True)
h5.close()
# done!
stimelength = str(datetime.timedelta(seconds=time.time() - t1))
print(('Summarized', len(allh5), 'files in:', stimelength))
# sanity checks
if not os.path.isdir(maindir):
print('ERROR: directory',maindir,'does not exists.')
sys.exit(0)
if os.path.isfile(output):
print('ERROR: file',output,'exists, delete or provide a new filename.')
sys.exit(0)
# start time
t1 = time.time()
# get all h5 files
allh5 = get_all_files(maindir,ext='.h5')
print('found',len(allh5),'H5 files.')
# create summary file
HDF5.create_aggregate_file(output,expectedrows=len(allh5),
summaryfile=True)
print('Summary file created, we start filling it.')
# fill it
h5 = HDF5.open_h5_file_append(output)
HDF5.fill_hdf5_aggregate_file(h5,allh5,summaryfile=True)
h5.close()
# done!
stimelength = str(datetime.timedelta(seconds=time.time()-t1))
print('Summarized',len(allh5),'files in:',stimelength)