client=TwilioRestClient(accsid,token)
arddata=serial.Serial('/dev/ttyACM0',19200)
while (1==1):
if(arddata.inWaiting()>0):
data=arddata.readline()
if(data[0]=='e'):
data = data[1:len(data)]
f=open("ecg.csv", "rw+")
f.write(str(data)+"\n")
#print ("ECG value "+data)
else if(data[0]=='t'):
#print("Temperature value: "+data)
temp=int(data)
f.close()
dataset = hb.get_data("ecg.csv")
hb.process(dataset, 0.75, 100)
bpm = hb.measures['bpm']
if(temp>37 or bpm>120):
if(temp>37):
message = client.messages.create(to="+919743451835", from_="9097265085",
body="The temperature is "+temp)
else if(bpm>120):
message = client.messages.create(to="+919743451835", from_="9097265085",
body="The heart rate is "+bpm +"BPM")
break #goto as another option
__author__ = 'mongolab'
SEED_DATA = [
{
k = k + 1
print("The start of the experiment was at line %i." % (k))
body = np.array(rawdata[k:])
data = pd.DataFrame(body, columns=header)
fs = hb.get_samplerate_mstimer(
[int(x) for x in data['unix_timestamp'].tolist()])
# print(np.floor(1000 / np.mean(diffs)) / 4)
voltages = np.array([intr(x) for x in data['heart_rate_voltage'].tolist()])
filtered = hb.butter_lowpass_filter(voltages,
cutoff=np.floor(fs / 4),
sample_rate=fs,
order=3)
enhanced = hb.enhance_peaks(filtered, iterations=2)
measures = hb.process(
enhanced, # array-like
fs, # frequency
report_time=True, # print the time for processing
calc_freq=True, # calcuate frequency domain
interp_clipping=False, # implied peak is interpolated
interp_threshold=940 # amp beyond which will be checked for clipping
)
# Visualize peaks for inspection
hb.plotter()
# -*- coding: utf-8 -*-
"""
Created on Thu Mar 29 12:37:04 2018
@author: Shubham
"""
import heartbeat as hb
import sys
if __name__ == '__main__':
hrdata = hb.get_data(sys.argv[1] + "/ecg.csv")
measures = hb.process(hrdata, 100.0, windowsize=0.1, report_time=True)
measures.pop('interp_rr_function')
measures.pop('interp_rr_linspace')
print(measures)
plt = hb.plotter(title='')
plt.grid(color='r', linestyle='-', linewidth=0.2)
my_dpi = 96
plt.savefig(sys.argv[1] + '/ecg.png', dpi=my_dpi * 10, bbox_inches='tight')
# plt.show()
import heartbeat as hb
import numpy as np
import matplotlib.pyplot as plt
import pandas as pd
rfile = open("5-gamers/gamer1-ppg-2000-01-01.csv", 'r')
ppg = []
for i, line in enumerate(rfile):
if i != 0:
line = line.split(',')
ppg.append(line[1].strip("\n"))
ppg = np.array([int(elem) for elem in ppg])
ppg = ppg[ppg >= 100]
plt.plot(ppg[1:1000])
plt.show()
measures = hb.process(ppg[300:1100], 100)
print(measures)
hb.plotter()
import heartbeat as hb
data = hb.get_data('heartbeat/data.csv')
measures = hb.process(data, 100.0)
print measures['bpm']
import heartbeat as hb
hrdata = hb.get_data('data2.csv', column_name='hr')
timerdata = hb.get_data('data2.csv', column_name='timer')
hb.process(hrdata, hb.get_samplerate_mstimer(timerdata))
#plot with different title
hb.plotter(title='Heart Beat Detection on Noisy Signal')