Exemple #1
0
import pdb
import f as features
import new_new_objects as objects
import param
import wc
import global_stuff

# hardcode parameters for the experiment here for now.

#the_dict = {'pdb_name':'1asy', 'chain_letter':'A', 'edge_feature_list':[features.xW], 'node_feature_list':[features.vW, features.uW, features.wW], 'dist_cut_off':5}

#the_params = param.param(the_dict)


import helper

file_location = 'mf_nodewise_0'

folder_name, the_params = helper.read_param(file_location)

the_params.set_param('p', '1p3d')
the_params.set_param('c', 'A')
the_params.set_param('st', 322)
the_params.set_param('en', 473)


ans = wc.get_stuff(objects.ciW, the_params, False, False, False)

print ans
Exemple #2
0
import _test

import wc

import new_new_objects as objects



import pdb

_test.init_crf()

from param import param


#import run_small_search
import helper

import sys
info_file = sys.argv[1]

relative_folder, the_params = helper.read_param(info_file)

the_params.set_param('tj',1)

results = wc.get_stuff(objects.ceW, the_params, False, True, True)
pdb.set_trace()
print 3
Exemple #3
0
import pdb
pdb.set_trace()
import f
import new_new_objects as objects

import wrapper
from wrapper_decorator import dec
import wc
import global_stuff

import sys
info_file = sys.argv[1]

import helper
asdf, the_params = helper.read_param(info_file)


the_params.set_param('which_wrapperq', objects.fW)
wc.get_stuff(objects.abW, the_params, True, False, False)