def logHasError(self,job,fdir='.'):
# NOTE: Make sure to check that the job exists before calling this fcn
if not self.isJob(job):
return False
fn = os.path.join(fdir,job + '.log')
rgx = 'Error when reading.*'
ret = run_process(['grep','-l','-e',rgx,fn],verbose=False)
return bool(ret)
def checkProgress(self,lines=5):
for fn in sorted(self.intg_full,key=self.getIntegrateTime):
log_file = os.path.join(self.fdir,"%s.log" % (fn))
if not os.path.exists(log_file):
continue
t = self.getLastModifiedTime("%s_scanpoints.txt" % (fn))
h,m,s = self.formatTime(t)
tot_tstr = "[%s:%s:%s]" % (h.rjust(2,"0"),m.rjust(2,"0"),s.rjust(2,"0"))
t = self.getIntegrateTime(fn)
h,m,s = self.formatTime(t)
int_tstr = "[%s:%s:%s]" % (h.rjust(2,"0"),m.rjust(2,"0"),s.rjust(2,"0"))
t = self.getLastModifiedTime(log_file)
h,m,s = self.formatTime(t)
mod_tstr = "[%s:%s:%s]" % (h.rjust(2,"0"),m.rjust(2,"0"),s.rjust(2,"0"))
#print "\nChecking: %s - %s - %s" % (fn,int_tstr,mod_tstr)
#print "\nChecking: %s - Total %s - Intg %s - LogMod %s" % (fn,tot_tstr,int_tstr,mod_tstr)
print "\nChecking: %s - %s - %s - %s" % (fn,tot_tstr,int_tstr,mod_tstr)
run_process(['tail','-n%d' % (lines),log_file])
def failedCodegen(self,job,fdir='.'):
if not self.isJob(job):
return False
fn = os.path.join(fdir,job + '.log')
if not os.path.exists(fn):
return False
rgx = '^Process output directory %s not found\.' % (job)
ret = run_process(['grep','-l','-e',rgx,fn],verbose=False)
return bool(ret)
def save(self, dst, force=False):
self.copy(dst, force=force)
for k in self.list():
v = self.getOption(k)
old = self.__line_map[k]
repl = " {0:>{w1}} = {1:<{w2}} {eol}".format(v,
k,
w1=self.val_width,
w2=self.key_width,
eol=self.EOL_COMMENT)
pat = r".*=\s*%s\s*[!#]?" % (k)
new = re.sub(pat, repl, old)
# Need to escape any special chars otherwise sed won't match the line
old = old.replace('\\', '\\\\').replace('*', '\\*')
new = new.replace('\\', '\\\\').replace('*', '\\*')
#print "{old:<{w}} --> {new}".format(old=old,new=new,w=self.line_width)
sed_cmd = "s|{old}|{new}|g".format(old=old, new=new)
run_process(['sed', '-i', '-e', sed_cmd, dst])
def logHasXsec(self,job,fdir='.'):
# NOTE: Make sure to check that the job exists before calling this fcn
fn = os.path.join(fdir,job + '.log')
rgx = 'Cross-section : '
ret = run_process(['grep','-l','-e',rgx,fn],verbose=False)
return bool(ret)