def dump_html(output, body):
title = output.info['title'] + " for " + output.info['tag']
doc = XHTML()
doc.head.title(title)
doc.body.h1(title)
doc.body.p(body.to_html())
output.write(str(doc))
def dump_html(output, body, columns=None):
title = output.info['title'] + " for " + output.info['tag']
doc = XHTML()
doc.head.title(title)
doc.body.h1(title)
doc.body.p.text(body.to_html(escape=False, columns=columns), escape=False)
output.write(str(doc))
def file_index(output, input_disease_symbol, input_disease_mondo, rtx_ui_url):
title = 'Results for ' + input_disease_symbol + '[' + input_disease_mondo + ']'
doc = XHTML()
doc.head.title(title)
doc.body.h1(title)
ul = doc.body.ul
ul.li.a("Input Disease Details", href="Definition.json")
ul.li.a("Disease Associated Genes", href="Disease_Associated_Genes.html")
ul.li.a("Functionally Similar Genes",
href="Functionally_Similar_Genes.html")
ul.li.a("Phenotypically Similar Genes",
href="Phenotypically_Similar_Genes.html")
ul.li.a("Gene Interactions", href="Gene_Interactions.html")
doc.body.p.a("RTX UI Display of Details",
href="https://rtx.ncats.io/?r=%s" %
rtx_ui_url.json()['response_id'])
doc.body.p.a("Reasoner API formatted JSON results",
href="https://rtx.ncats.io/api/rtx/v1/response/%s" %
rtx_ui_url.json()['response_id'])
output.write(str(doc))