def test_translate_to_prot_valid_dna2(self):
valid_dna2 = 'GAGAGAGAGAGAGAGAGAT'
valid_dna2_pro0 = 'ERERER'
valid_dna2_pro1 = 'RERERD'
valid_dna2_pro2 = 'ERERE'
prot_seqs = translate_to_prot(valid_dna2)
# assure correct type
self.assertEqual(list, type(prot_seqs), 'Incorrect type')
# assure correct length
self.assertEqual(3, len(prot_seqs), 'Incorrect length')
# assure protein sequences shorter than dna sequence
self.assertTrue(len(prot_seqs[0]) <= len(valid_dna2), 'Too many prots')
self.assertTrue(len(prot_seqs[1]) <= len(valid_dna2), 'Too many prots')
self.assertTrue(len(prot_seqs[2]) <= len(valid_dna2), 'Too many prots')
# assure protein translated correctly
self.assertEqual(valid_dna2_pro0, prot_seqs[0], 'Incorrect prot translation')
self.assertEqual(valid_dna2_pro1, prot_seqs[1], 'Incorrect prot translation')
self.assertEqual(valid_dna2_pro2, prot_seqs[2], 'Incorrect prot translation')
print(valid_dna2)
print("".join([(x + " ") for x in prot_seqs[0]]))
print("".join([(" " + x + " ") for x in prot_seqs[1]]))
print("".join([(" " + x) for x in prot_seqs[2]]))
def test_translate_to_prot_valid_dna1(self):
valid_dna1 = 'TTATATATTTATATATTTT'
valid_dna1_pro0 = 'LYIYIF'
valid_dna1_pro1 = 'YIFIYF'
valid_dna1_pro2 = 'IYLYI'
prot_seqs = translate_to_prot(valid_dna1)
# assure correct type
self.assertEqual(list, type(prot_seqs), 'Incorrect type')
# assure correct length
self.assertEqual(3, len(prot_seqs), 'Incorrect length')
# assure protein sequences shorter than dna sequence
self.assertTrue(len(prot_seqs[0]) <= len(valid_dna1), 'Too many prots')
self.assertTrue(len(prot_seqs[1]) <= len(valid_dna1), 'Too many prots')
self.assertTrue(len(prot_seqs[2]) <= len(valid_dna1), 'Too many prots')
# assure protein translated correctly
self.assertEqual(valid_dna1_pro0, prot_seqs[0], 'Incorrect prot translation')
self.assertEqual(valid_dna1_pro1, prot_seqs[1], 'Incorrect prot translation')
self.assertEqual(valid_dna1_pro2, prot_seqs[2], 'Incorrect prot translation')
print(valid_dna1)
print("".join([(x + " ") for x in prot_seqs[0]]))
print("".join([(" " + x + " ") for x in prot_seqs[1]]))
print("".join([(" " + x) for x in prot_seqs[2]]))