def test_merge_entities():
x = Entity("x", [1, 2, 3], weight=1, color="r")
y = Entity("y", [2, 3, 4], weight=3)
z = Entity.merge_entities("z", x, y)
assert z.uidset == set([1, 2, 3, 4])
assert z.weight == 3
assert z.color == "r"
def test_merge_entities():
x = Entity('x',[1,2,3],weight=1,color='r')
y = Entity('y',[2,3,4],weight=3)
z = Entity.merge_entities('z',x,y)
assert z.uidset == set([1,2,3,4])
assert z.weight == 3
assert z.color == 'r'
def test_entity_depth():
e1 = Entity('e1')
e2 = Entity('e2',[e1])
e3 = Entity('e3',[e2])
e4 = Entity('e4',[e3,e1])
assert e4.depth() == 3
e3.remove(e2)
assert e4.depth() == 1
def test_entity_constructor():
ent = Entity("edge", {"A", "C", "K"})
assert ent.uid == "edge"
assert ent.size() == 3
assert len(ent.uidset) == 3
assert len(ent.children) == 0
assert isinstance(ent.incidence_dict["A"], set)
assert "A" in ent
def test_entity_constructor():
ent = Entity('edge',{'A', 'C', 'K'})
assert ent.uid == 'edge'
assert ent.size() == 3
assert len(ent.uidset) == 3
assert len(ent.children) == 0
assert isinstance(ent.incidence_dict['A'],set)
assert 'A' in ent
def test_entity_depth():
e1 = Entity("e1")
e2 = Entity("e2", [e1])
e3 = Entity("e3", [e2])
e4 = Entity("e4", [e3, e1])
assert e4.depth() == 3
e3.remove(e2)
assert e4.depth() == 1
def test_add_no_overwrite():
# adding and entity of the same name as an existing entity
# only updates properties
e1 = Entity("e1", {"A", "C", "K"})
e2 = Entity("C", ["X"], w=5)
assert "X" in e2.elements
e1.add(e2)
assert "X" not in e1["C"]
assert e1["C"].w == 5
def test_add_no_overwrite():
## adding and entity of the same name as an existing entity
## only updates properties
e1 = Entity('e1',{'A','C','K'})
e2 = Entity('C', ['X'], w=5)
assert 'X' in e2.elements
e1.add(e2)
assert 'X' not in e1['C']
assert e1['C'].w == 5
def test_entity_construct_from_entity(triloop):
e1 = Entity("e1", elements=triloop.edgedict)
e2 = Entity("e2", entity=e1)
e3 = Entity("e3", entity=e2, elements={"Z": "A"})
assert e1 != e2
assert e1.elements == e2.elements
assert e1.children == e3.children
assert e1.elements != e3.elements
with pytest.raises(HyperNetXError):
e4 = Entity("e1", entity=e1)
def test_add_node_to_edge(seven_by_six):
sbs = seven_by_six
H = Hypergraph(sbs.edgedict)
assert H.shape == (7, 6)
# add node not already in hypergraph to edge
# alreadyin hypergraph
node = Entity("B")
edge = H.edges["P"]
H.add_node_to_edge(node, edge)
assert H.shape == (8, 6)
# add edge with nodes already in hypergraph
H.add_edge(Entity("Z", ["A", "B"]))
assert H.shape == (8, 7)
# add edge not in hypergraph with nodes not in hypergraph
H.add_edge(Entity("Y", ["M", "N"]))
assert H.shape == (10, 8)
def test_add_node_to_edge(seven_by_six):
sbs = seven_by_six
H = Hypergraph(sbs.edgedict)
assert H.shape == (7, 6)
# add node not already in hypergraph to edge
# alreadyin hypergraph
node = Entity('B')
edge = H.edges['P']
H.add_node_to_edge(node, edge)
assert H.shape == (8, 6)
# add edge with nodes already in hypergraph
H.add_edge(Entity('Z', ['A', 'B']))
assert H.shape == (8, 7)
# add edge not in hypergraph with nodes not in hypergraph
H.add_edge(Entity('Y', ['M', 'N']))
assert H.shape == (10, 8)
def test_add_and_merge_properties():
### assert that adding an existing entity will not overwrite
e1 = Entity('e1',{'A', 'C', 'K'})
e2 = Entity('C', w=5)
e1.add(e2)
assert e1['C'].w == 5
ent3 = Entity('C')
e1.add(ent3)
assert e1['C'].w ==5
def test_add_and_merge_properties():
# assert that adding an existing entity will not overwrite
e1 = Entity("e1", {"A", "C", "K"})
e2 = Entity("C", w=5)
e1.add(e2)
assert e1["C"].w == 5
ent3 = Entity("C")
e1.add(ent3)
assert e1["C"].w == 5
def test_entity_set():
eset = EntitySet('eset1', {'A', 'C', 'K'})
eset2 = eset.clone('eset2')
assert eset.elements == eset2.elements
assert len(eset) == 3
assert eset.uid == 'eset1'
assert len(eset.children) == 0
with pytest.raises(HyperNetXError) as excinfo:
eset2.add(Entity('Z',['A','C','B']))
assert 'Fails the bipartite condition' in str(excinfo.value)
def test_entity_set():
eset = EntitySet("eset1", {"A", "C", "K"})
eset2 = eset.clone("eset2")
assert eset.elements == eset2.elements
assert len(eset) == 3
assert eset.uid == "eset1"
assert len(eset.children) == 0
with pytest.raises(HyperNetXError) as excinfo:
eset2.add(Entity("Z", ["A", "C", "B"]))
assert "Fails the bipartite condition" in str(excinfo.value)
def test_entity_no_self_reference():
# confirm entity may not add itself.
ent = Entity("e", {"A", "C", "K"})
with pytest.raises(HyperNetXError) as excinfo:
ent.add(Entity("e"))
assert "Self reference" in str(excinfo.value)
with pytest.raises(HyperNetXError) as excinfo2:
ent.add(ent)
assert "Self reference" in str(excinfo2.value)
def test_entity_no_self_reference():
### confirm entity may not add itself.
ent = Entity('e',{'A', 'C', 'K'})
with pytest.raises(HyperNetXError) as excinfo:
ent.add(Entity('e'))
assert 'Self reference' in str(excinfo.value)
with pytest.raises(HyperNetXError) as excinfo2:
ent.add(ent)
assert 'Self reference' in str(excinfo2.value)
def test_entity_add():
# add an element with property
ent = Entity("e", {"A", "C", "K"})
ent.add(Entity("D", [1, 2, 3], color="red"))
assert ent.size() == 4
assert len(ent.children) == 3
assert 2 in ent["D"].elements
assert ent["D"].color == "red"
def test_entity_add():
### add an element with property
ent = Entity('e',{'A', 'C', 'K'})
ent.add(Entity('D',[1,2,3],color='red'))
assert ent.size() == 4
assert len(ent.children) == 3
assert 2 in ent['D'].elements
assert ent['D'].color == 'red'
def test_equality():
## Different uids, elements generated differently
e1 = Entity('e1',[1,2,3])
e2 = Entity('e2',[1,2,3])
assert not e1 == e2
assert not e1[1] == e2[1]
## Different uids, elements generated the same
elts = [Entity(uid) for uid in [1,2,3]]
e1 = Entity('e1',elts)
e2 = Entity('e2',elts)
assert not e1==e2
assert e1[1]==e2[1]
## Different properties only
e1 = Entity('e1',elts)
e2 = Entity('e1',elts,weight=1)
assert not e1==e2
def test_entity_from_dict_mixed_types():
e1 = Entity("e1", [2])
d = {"e1": e1, "e2": [5]}
e3 = Entity("e3", d)
assert 2 in e3.children
def test_entity_remove():
ent = Entity("e", {"A", "C", "K"})
assert ent.size() == 3
ent.remove("A")
assert ent.size() == 2
def test_static_hypergraph_constructor_entity(seven_by_six):
sbs = seven_by_six
E = Entity('sbs', sbs.edgedict)
H = Hypergraph(E, static=True)
assert H.isstatic
assert 'A' in H.edges.incidence_dict['P']
def test_entity_from_dict_mixed_types():
e1 = Entity('e1',[2])
d = {'e1':e1, 'e2':[5]}
e3 = Entity('e3',d)
assert 2 in e3.children
def test_entity_remove():
ent = Entity('e',{'A', 'C', 'K'})
assert ent.size() == 3
ent.remove('A')
assert ent.size() == 2