def test_plot_1d_cluster():
data_reduced_1d = reducer(data, ndims=1)
geo = plot.plot(data_reduced_1d, cluster='KMeans', show=False)
assert all([i.shape[1] == 1
for i in geo.data]) and len(geo.ax.get_lines()) == 3
def test_plot_3d():
data_reduced_3d = reduc(data, ndims=3)
_, _, data_3d = plot.plot(data_reduced_3d, show=False, return_data=True)
assert all([i.shape[1] == 3 for i in data_3d])
def test_plot_data_is_list():
_, _, data_nd = plot.plot(data, show=False, return_data=True)
assert type(data_nd) is list
def test_plot_animate_check_line_ani():
_, _, _, line_ani = plot.plot(data,
animate=True,
show=False,
return_data=True)
assert isinstance(line_ani, mpl.animation.FuncAnimation)
def test_plot_1dim():
_, _, data_1dim = plot.plot(np.array([1, 2, 3, 4]),
show=False,
return_data=True)
assert data_1dim[0].ndim == 2
def test_plot_reduce_align5d():
# should return 5d data since ndims=5
geo = plot.plot(weights, ndims=5, align=True, show=False)
assert all([i.shape[1] == 5 for i in geo.xform_data])
def test_reduce_geo():
geo = plot(data, show=False)
reduced_data_3d = reducer(geo, ndims=3)
assert reduced_data_3d[0].shape==(10,3)
def test_plot_animate_check_fig():
geo = plot.plot(data, animate=True, show=False)
assert isinstance(geo.fig, mpl.figure.Figure)
def test_plot_animate_check_ax():
geo = plot.plot(data, animate=True, show=False)
assert isinstance(geo.ax, mpl.axes._axes.Axes)
def test_plot_nd_animate():
geo = plot.plot(data, animate=True, show=False)
assert all([i.shape[1] == d.shape[1] for i, d in zip(geo.data, data)])
def test_plot_data_animate_is_list():
geo = plot.plot(data, animate=True, show=False)
assert type(geo.data) is list
def test_plot_2d_animate():
data_reduced_2d = reducer(data, ndims=2)
with pytest.raises(Exception) as e_info:
plot.plot(data_reduced_2d, animate=True, show=False)
def test_plot_data_is_list():
geo = plot.plot(data, show=False)
assert type(geo.data) is list
def test_plot_nd():
geo = plot.plot(data, show=False)
assert all([i.shape[1] == d.shape[1] for i, d in zip(geo.data, data)])
def test_plot_reduce2d():
# should return 2d data since ndims=2
geo = plot.plot(data, ndims=2, show=False)
assert all([i.shape[1] == 2 for i in geo.xform_data])
def test_plot_animate_check_line_ani():
geo = plot.plot(data, animate=True, show=False)
assert isinstance(geo.line_ani, mpl.animation.FuncAnimation)
def test_plot_reduce1d():
# should return 1d data since ndims=1
geo = plot.plot(data, ndims=1, show=False)
assert all([i.shape[1] == 1 for i in geo.xform_data])
def test_plot_1d():
data_reduced_1d = reducer(data, ndims=1)
geo = plot.plot(data_reduced_1d, show=False)
assert all([i.shape[1] == 1 for i in geo.data])
def test_plot_reduce10d():
# should return 10d data since ndims=10
geo = plot.plot(weights, ndims=10, show=False)
assert all([i.shape[1] == 10 for i in geo.xform_data])
def test_plot_1dim():
geo = plot.plot(np.array([1, 2, 3, 4]), show=False)
assert geo.data[0].ndim == 2
def test_plot_animate_check_ax():
_, ax, _, _ = plot.plot(data, animate=True, show=False, return_data=True)
assert isinstance(ax, mpl.axes._axes.Axes)
def test_plot_2d():
data_reduced_2d = reducer(data, ndims=2)
geo = plot.plot(data_reduced_2d, show=False)
assert all([i.shape[1] == 2 for i in geo.data])
def test_plot_1d():
data_reduced_1d = reduc(data, ndims=1)
_, _, data_1d = plot.plot(data_reduced_1d, show=False, return_data=True)
assert all([i.shape[1] == 1 for i in data_1d])
def test_plot_3d():
data_reduced_3d = reducer(data, ndims=3)
geo = plot.plot(data_reduced_3d, show=False)
assert all([i.shape[1] == 3 for i in geo.data])
def test_plot_2d():
data_reduced_2d = reduc(data, ndims=2)
_, _, data_2d = plot.plot(data_reduced_2d, show=False, return_data=True)
assert all([i.shape[1] == 2 for i in data_2d])
def test_plot_reduce_none():
# Should return same dimensional data if ndims is None
geo = plot.plot(data, show=False)
assert all([i.shape[1] == d.shape[1] for i, d in zip(geo.data, data)])
def test_plot_nd():
_, _, data_nd = plot.plot(data, show=False, return_data=True)
assert all([i.shape[1] == 3 for i in data_nd])
def test_plot_reduce3d():
# should return 3d data since ndims=3
geo = plot.plot(data, ndims=3, show=False)
assert all([i.shape[1] == 3 for i in geo.xform_data])
def test_plot_check_fig():
fig, _, _ = plot.plot(data, show=False, return_data=True)
assert isinstance(fig, mpl.figure.Figure)
def test_normalize_geo():
geo = plot(data, show=False)
norm_data = normalize(geo, normalize='row')
assert np.allclose(np.mean(np.vstack(norm_data), axis=1),0)