def _show_matches_fn(aid, orank, pnum): """ Helper function for drawing matches to one aid """ aug = 'rank=%r\n' % orank _kwshow['pnum'] = pnum _kwshow['title_aug'] = aug #draw_ell = annot_mode == 1 #draw_lines = annot_mode >= 1 # If we already are showing the query dont show it here if sidebyside: # Draw each match side by side the query if viz_name_score: cm.show_single_namematch(qreq_, ibs.get_annot_nids(aid), **_kwshow) else: _kwshow['draw_border'] = False _kwshow['draw_lbl'] = False _kwshow['notitle'] = True _kwshow['vert'] = False cm.show_single_annotmatch(qreq_, aid, **_kwshow) #viz_matches.show_matches(ibs, cm, aid, qreq_=qreq_, **_kwshow) else: # Draw each match by themselves data_config2_ = None if qreq_ is None else qreq_.get_external_data_config2( ) #_kwshow['draw_border'] = kwargs.get('draw_border', True) #_kwshow['notitle'] = ut.get_argflag(('--no-title', '--notitle')) viz_chip.show_chip(ibs, aid, annote=False, notitle=True, data_config2_=data_config2_, **_kwshow)
def show_each_fgweight_chip(self): viz_chip.show_chip(self.ibs, self.qaid, fnum=pt.next_fnum(), weight_label='fg_weights') viz_chip.show_chip(self.ibs, self.daid, fnum=pt.next_fnum(), weight_label='fg_weights') #self.draw() pt.draw()
def _show_matches_fn(aid, orank, pnum): """ Helper function for drawing matches to one aid """ aug = 'rank=%r\n' % orank _kwshow['pnum'] = pnum _kwshow['title_aug'] = aug #draw_ell = annot_mode == 1 #draw_lines = annot_mode >= 1 # If we already are showing the query dont show it here if sidebyside: # Draw each match side by side the query if viz_name_score: cm.show_single_namematch(qreq_, ibs.get_annot_nids(aid), **_kwshow) else: _kwshow['draw_border'] = False _kwshow['draw_lbl'] = False _kwshow['notitle'] = True _kwshow['vert'] = False cm.show_single_annotmatch(qreq_, aid, **_kwshow) #viz_matches.show_matches(ibs, cm, aid, qreq_=qreq_, **_kwshow) else: # Draw each match by themselves data_config2_ = None if qreq_ is None else qreq_.get_external_data_config2() #_kwshow['draw_border'] = kwargs.get('draw_border', True) #_kwshow['notitle'] = ut.get_argflag(('--no-title', '--notitle')) viz_chip.show_chip(ibs, aid, annote=False, notitle=True, data_config2_=data_config2_, **_kwshow)
def show_each_dstncvs_chip(self, dodraw=True): """ CommandLine: python -m ibeis.viz.interact.interact_matches --test-show_each_dstncvs_chip --show Example: >>> # DISABLE_DOCTEST >>> from ibeis.viz.interact.interact_matches import * # NOQA >>> self = testdata_match_interact(mx=1) >>> self.show_each_dstncvs_chip(dodraw=False) >>> pt.show_if_requested() """ dstncvs1, dstncvs2 = scoring.get_kpts_distinctiveness(self.ibs, [self.qaid, self.daid]) print('dstncvs1_stats = ' + ut.get_stats_str(dstncvs1)) print('dstncvs2_stats = ' + ut.get_stats_str(dstncvs2)) weight_label = 'dstncvs' showkw = dict(weight_label=weight_label, ell=False, pts=True) viz_chip.show_chip(self.ibs, self.qaid, weights=dstncvs1, fnum=pt.next_fnum(), **showkw) viz_chip.show_chip(self.ibs, self.daid, weights=dstncvs2, fnum=pt.next_fnum(), **showkw) if dodraw: viz.draw()
def show_each_dstncvs_chip(self, dodraw=True): """ CommandLine: python -m ibeis.viz.interact.interact_matches --test-show_each_dstncvs_chip --show Example: >>> # DISABLE_DOCTEST >>> from ibeis.viz.interact.interact_matches import * # NOQA >>> self = testdata_match_interact(mx=1) >>> self.show_each_dstncvs_chip(dodraw=False) >>> pt.show_if_requested() """ dstncvs1, dstncvs2 = scoring.get_kpts_distinctiveness( self.ibs, [self.qaid, self.daid]) print('dstncvs1_stats = ' + ut.get_stats_str(dstncvs1)) print('dstncvs2_stats = ' + ut.get_stats_str(dstncvs2)) weight_label = 'dstncvs' showkw = dict(weight_label=weight_label, ell=False, pts=True) viz_chip.show_chip(self.ibs, self.qaid, weights=dstncvs1, fnum=pt.next_fnum(), **showkw) viz_chip.show_chip(self.ibs, self.daid, weights=dstncvs2, fnum=pt.next_fnum(), **showkw) if dodraw: viz.draw()
def testshow_extramargin_info(ibs, aid_list, arg_list, newsize_list, halfoffset_cs_list): #cfpath, gfpath, bbox, theta, new_size, filter_list = tup # TEMP TESTING from vtool import chip as ctool import plottool as pt import vtool as vt from ibeis.viz import viz_chip index = 0 cfpath, gfpath, bbox, theta, new_size, filter_list = arg_list[index] chipBGR = ctool.compute_chip(gfpath, bbox, theta, new_size, filter_list) bbox_cs_list = [ (xo_pcs, yo_pcs, w_pcs, h_pcs) for (w_pcs, h_pcs), (xo_pcs, yo_pcs) in zip(newsize_list, halfoffset_cs_list) ] bbox_pcs = bbox_cs_list[index] aid = aid_list[0] print('new_size = %r' % (new_size,)) print('newsize_list[index] = %r' % (newsize_list[index],)) fnum = 1 viz_chip.show_chip(ibs, aid, pnum=(1, 3, 1), fnum=fnum, annote=False, in_image=True , title_suffix='\noriginal image') viz_chip.show_chip(ibs, aid, pnum=(1, 3, 2), fnum=fnum, annote=False, title_suffix='\noriginal chip') bboxed_chip = vt.draw_verts(chipBGR, vt.scaled_verts_from_bbox(bbox_pcs, theta, 1, 1)) pt.imshow(bboxed_chip, pnum=(1, 3, 3), fnum=fnum, title='scaled chip with expanded margin.\n(orig margin drawn in orange)') pt.show_if_requested()
def show_each_chip(self): viz_chip.show_chip(self.ibs, self.qaid, fnum=pt.next_fnum(), nokpts=True) viz_chip.show_chip(self.ibs, self.daid, fnum=pt.next_fnum(), nokpts=True) viz.draw()
def _show_query_fn(plotx_shift, rowcols): """ helper for show_qres """ plotx = plotx_shift + 1 pnum = (rowcols[0], rowcols[1], plotx) #print('[viz] Plotting Query: pnum=%r' % (pnum,)) _kwshow = dict(draw_kpts=annot_mode) _kwshow.update(kwargs) _kwshow['prefix'] = 'q' _kwshow['pnum'] = pnum _kwshow['aid2_color'] = aid2_color _kwshow['draw_ell'] = annot_mode >= 1 viz_chip.show_chip(ibs, cm.qaid, annote=False, qreq_=qreq_, **_kwshow)
def testshow_extramargin_info(ibs, aid_list, arg_list, newsize_list, halfoffset_cs_list): #cfpath, gfpath, bbox, theta, new_size, filter_list = tup # TEMP TESTING from vtool import chip as ctool import plottool as pt import vtool as vt from ibeis.viz import viz_chip index = 0 cfpath, gfpath, expanded_bbox, theta, expanded_new_size, filter_list = arg_list[ index] expanded_chipBGR = ctool.compute_chip(gfpath, expanded_bbox, theta, expanded_new_size, filter_list) bbox_cs_list = [ (xo_pcs, yo_pcs, w_pcs, h_pcs) for (w_pcs, h_pcs), (xo_pcs, yo_pcs) in zip(newsize_list, halfoffset_cs_list) ] bbox_pcs = bbox_cs_list[index] aid = aid_list[0] #print('new_size = %r' % (new_size,)) print('newsize_list[index] = %r' % (newsize_list[index], )) fnum = 1 viz_chip.show_chip(ibs, aid, pnum=(1, 3, 1), fnum=fnum, annote=False, in_image=True, title_suffix='\noriginal image') viz_chip.show_chip(ibs, aid, pnum=(1, 3, 2), fnum=fnum, annote=False, title_suffix='\noriginal chip') bboxed_chip = vt.draw_verts( expanded_chipBGR, vt.scaled_verts_from_bbox(bbox_pcs, theta, 1, 1)) pt.imshow( bboxed_chip, pnum=(1, 3, 3), fnum=fnum, title='scaled chip with expanded margin.\n(orig margin drawn in orange)' ) pt.gca().set_xlabel(str(bboxed_chip.shape)) pt.show_if_requested()
def sanity_checks(offset_list, Y_list, query_annots, ibs): nfeat_list = np.diff(offset_list) for Y, nfeat in ut.ProgIter(zip(Y_list, nfeat_list), 'checking'): assert nfeat == sum(ut.lmap(len, Y.fxs_list)) if False: # Visualize queries # Look at the standard query images here # http://www.robots.ox.ac.uk:5000/~vgg/publications/2007/Philbin07/philbin07.pdf from ibeis.viz import viz_chip import plottool as pt pt.qt4ensure() fnum = 1 pnum_ = pt.make_pnum_nextgen(len(query_annots.aids) // 5, 5) for aid in ut.ProgIter(query_annots.aids): pnum = pnum_() viz_chip.show_chip(ibs, aid, in_image=True, annote=False, notitle=True, draw_lbls=False, fnum=fnum, pnum=pnum)
def show(self, *args, **kwargs): if len(self) != 1: raise ValueError('Can only show one, got {}'.format(len(self))) from ibeis.viz import viz_chip for aid in self: return viz_chip.show_chip(self._ibs, aid, *args, **kwargs)
def show_annot(ibs, aid, *args, **kwargs): """ viz helper see ibeis.viz.viz_chip.show_chip """ from ibeis.viz import viz_chip return viz_chip.show_chip(ibs, aid, *args, **kwargs)
def plot_chip_metric(ibs, aid, metric=None, fnum=1, lbl='', figtitle='', colortype='score', darken=.5, cmap_='hot', reverse_cmap=False, **kwargs): """ Plots one annotation with one metric. The word metric is used liberally. Example: >>> from ibeis.algo.hots.smk.smk_plots import * # NOQA >>> from ibeis.algo.hots.smk import smk_debug >>> from ibeis.algo.hots.smk import smk_plots >>> from ibeis.algo.hots.smk import smk_repr >>> #tup = smk_debug.testdata_raw_internals0(db='GZ_ALL', nWords=64000) >>> #tup = smk_debug.testdata_raw_internals0(db='GZ_ALL', nWords=8000) >>> #tup = smk_debug.testdata_raw_internals0(db='PZ_Master0', nWords=64000) >>> tup = smk_debug.testdata_raw_internals0(db='PZ_Mothers', nWords=8000) >>> ibs, annots_df, daids, qaids, invindex, qreq_ = tup >>> smk_repr.compute_data_internals_(invindex, qreq_.qparams, delete_rawvecs=False) >>> invindex.idx2_wxs = np.array(invindex.idx2_wxs) >>> metric = None >>> aid = 1 >>> fnum = 0 >>> lbl='test' >>> colortype='score' >>> kwargs = {'annote': False} #>>> df2.rrr() >>> smk_plots.plot_chip_metric(ibs, aid, metric, fnum, lbl, colortype, **kwargs) >>> df2.present() """ import plottool.draw_func2 as df2 from ibeis.viz import viz_chip df2.figure(fnum=fnum, doclf=True, docla=True) if metric is not None: if colortype == 'score': colors = df2.scores_to_color(metric, cmap_=cmap_, reverse_cmap=reverse_cmap) elif colortype == 'label': colors = df2.label_to_colors(metric) elif colortype == 'custom': # Give ranks of -1 and -2 special meaning val2_customcolor = { -1: df2.UNKNOWN_PURP, -2: df2.LIGHT_BLUE, } # Inconsistent but visable colors scale_max = .7 #consistent colors (needs to know highest K) #maxval = np.array(metric).max() #scale_max = .7 * (float(maxval) / 20.0) colors = df2.scores_to_color(metric, cmap_=cmap_, reverse_cmap=reverse_cmap, scale_max=scale_max, val2_customcolor=val2_customcolor) else: raise ValueError('no known colortype = %r' % (colortype,)) else: colors = 'distinct' viz_chip.show_chip(ibs, aid, color=colors, darken=darken, ell_alpha=.8, #ell_linewidth=4, ell_linewidth=2, **kwargs) df2.set_figtitle(figtitle) if metric is not None: cb = df2.colorbar(metric, colors, custom=(colortype == 'custom')) cb.set_label(lbl)
def show_each_fgweight_chip(self): viz_chip.show_chip(self.ibs, self.qaid, fnum=pt.next_fnum(), weight_label='fg_weights') viz_chip.show_chip(self.ibs, self.daid, fnum=pt.next_fnum(), weight_label='fg_weights') viz.draw()
def show_multiple_chips(ibs, aid_list, in_image=True, fnum=0, sel_aids=[], subtitle='', annote=False, **kwargs): """ CommandLine: python -m ibeis.viz.viz_name --test-show_multiple_chips --show --no-inimage python -m ibeis.viz.viz_name --test-show_multiple_chips --show --db NNP_Master3 --aids=6435,9861,137,6563,9167,12547,9332,12598,13285 --no-inimage --notitle python -m ibeis.viz.viz_name --test-show_multiple_chips --show --db NNP_Master3 --aids=137,6563,12547,9332,12598,13285 --no-inimage --notitle --adjust=.05 python -m ibeis.viz.viz_name --test-show_multiple_chips --show --db NNP_Master3 --aids=6563,9332,13285,12598 --no-inimage --notitle --adjust=.05 --rc=1,4 python -m ibeis.viz.viz_name --test-show_multiple_chips --show --db PZ_Master0 --aids=1288 --no-inimage --notitle --adjust=.05 python -m ibeis.viz.viz_name --test-show_multiple_chips --show --db PZ_Master0 --aids=4020,4839 --no-inimage --notitle --adjust=.05 python -m ibeis.viz.viz_name --test-show_multiple_chips --db NNP_Master3 --aids=6524,6540,6571,6751 --no-inimage --notitle --adjust=.05 --diskshow python -m ibeis.viz.viz_name --test-show_multiple_chips --db PZ_MTEST -a default:index=0:4 --show --aids=1 --doboth --show --no-inimage python -m ibeis.viz.viz_name --test-show_multiple_chips --db PZ_MTEST --aids=1 --doboth --show --no-inimage python -m ibeis.viz.viz_name --test-show_multiple_chips --db PZ_MTEST --aids=1 --doboth --rc=2,1 --show --no-inimage python -m ibeis.viz.viz_name --test-show_multiple_chips --db PZ_MTEST --aids=1 --doboth --rc=2,1 --show --notitle --trydrawline --no-draw_lbls python -m ibeis.viz.viz_name --test-show_multiple_chips --db PZ_MTEST --aids=1,2 --doboth --show --notitle --trydrawline python -m ibeis.viz.viz_name --test-show_multiple_chips --db PZ_MTEST --aids=1,2,3,4,5 --doboth --rc=2,5 --show --chrlbl --trydrawline --qualtitle --no-figtitle --notitle --doboth --doboth --show python -m ibeis.viz.viz_name --test-show_multiple_chips --db NNP_Master3 --aids=15419 --doboth --rc=2,1 --show --notitle --trydrawline --no-draw_lbls Example: >>> # DISABLE_DOCTEST >>> from ibeis.viz.viz_name import * # NOQA >>> import ibeis >>> ibs, aid_list, in_image = testdata_multichips() >>> if True: >>> import matplotlib as mpl >>> from ibeis.scripts.thesis import TMP_RC >>> mpl.rcParams.update(TMP_RC) >>> fnum = 0 >>> sel_aids = [] >>> subtitle = '' >>> annote = False >>> fig = show_multiple_chips(ibs, aid_list, in_image, fnum, sel_aids, subtitle, annote) >>> ut.quit_if_noshow() >>> fig.canvas.draw() >>> ut.show_if_requested() """ fnum = pt.ensure_fnum(fnum) nAids = len(aid_list) if nAids == 0: fig = df2.figure(fnum=fnum, pnum=(1, 1, 1), **kwargs) df2.imshow_null(fnum=fnum, **kwargs) return fig # Trigger computation of all chips in parallel ibsfuncs.ensure_annotation_data(ibs, aid_list, chips=(not in_image or annote), feats=annote) print('[viz_name] * annot_vuuid=%r' % ((ibs.get_annot_visual_uuids(aid_list), ))) print('[viz_name] * aid_list=%r' % ((aid_list, ))) DOBOTH = ut.get_argflag('--doboth') rc = ut.get_argval('--rc', type_=list, default=None) if rc is None: nRows, nCols = ph.get_square_row_cols(nAids * (2 if DOBOTH else 1)) else: nRows, nCols = rc notitle = ut.get_argflag('--notitle') draw_lbls = not ut.get_argflag('--no-draw_lbls') show_chip_kw = dict(annote=annote, in_image=in_image, notitle=notitle, draw_lbls=draw_lbls) #print('[viz_name] * r=%r, c=%r' % (nRows, nCols)) #gs2 = gridspec.GridSpec(nRows, nCols) pnum_ = df2.get_pnum_func(nRows, nCols) fig = df2.figure(fnum=fnum, pnum=pnum_(0), **kwargs) fig.clf() ax_list1 = [] for px, aid in enumerate(aid_list): print('px = %r' % (px, )) _fig, _ax1 = viz_chip.show_chip(ibs, aid=aid, pnum=pnum_(px), **show_chip_kw) print('other_aids = %r' % (ibs.get_annot_contact_aids(aid), )) ax = df2.gca() ax_list1.append(_ax1) if aid in sel_aids: df2.draw_border(ax, df2.GREEN, 4) if ut.get_argflag('--chrlbl') and not DOBOTH: ax.set_xlabel('(' + chr(ord('a') - 1 + px) + ')') elif ut.get_argflag('--numlbl') and not DOBOTH: ax.set_xlabel('(' + str(px + 1) + ')') #plot_aid3(ibs, aid) # HACK to show in image and not in image if DOBOTH: #ut.embed() #ph.get_plotdat_dict(ax_list1[1]) #ph.get_plotdat_dict(ax_list2[1]) ax_list2 = [] show_chip_kw['in_image'] = not show_chip_kw['in_image'] start = px + 1 for px, aid in enumerate(aid_list, start=start): _fig, _ax2 = viz_chip.show_chip(ibs, aid=aid, pnum=pnum_(px), **show_chip_kw) ax = df2.gca() ax_list2.append(_ax2) if ut.get_argflag('--chrlbl'): ax.set_xlabel('(' + chr(ord('a') - start + px) + ')') elif ut.get_argflag('--numlbl'): ax.set_xlabel('(' + str(px - start + 1) + ')') if ut.get_argflag('--qualtitle'): qualtext = ibs.get_annot_quality_texts(aid) ax.set_title(qualtext) if aid in sel_aids: df2.draw_border(ax, df2.GREEN, 4) if in_image: ax_list1, ax_list2 = ax_list2, ax_list1 if ut.get_argflag('--trydrawline'): # Unfinished #ut.embed() # Draw lines between corresponding axes # References: # http://stackoverflow.com/questions/17543359/drawing-lines-between-two-plots-in-matplotlib import matplotlib as mpl import vtool as vt # !!! #http://matplotlib.org/users/transforms_tutorial.html #invTransFigure_fn1 = fig.transFigure.inverted().transform #invTransFigure_fn2 = fig.transFigure.inverted().transform #print(ax_list1) #print(ax_list2) assert len(ax_list1) == len(ax_list2) for ax1, ax2 in zip(ax_list1, ax_list2): #_ = ax1.get_window_extent().transformed(fig.dpi_scale_trans.inverted()) #bbox1 = (0, 0, _.width * fig.dpi, _.height * fig.dpi) # returns in figure coordinates #bbox1 = df2.get_axis_bbox(ax=ax1) #if bbox1[-1] < 0: # # Weird bug # bbox1 = bbox1[1] print('--') print('ax1 = %r' % (ax1, )) print('ax2 = %r' % (ax2, )) chipshape = ph.get_plotdat(ax1, 'chipshape') #_bbox1 = ax1.get_window_extent().transformed(fig.dpi_scale_trans.inverted()) #bbox1 = (0, 0, _bbox1.width * fig.dpi, _bbox1.height * fig.dpi) bbox1 = (0, 0, chipshape[1], chipshape[0]) aid_ = ph.get_plotdat(ax2, 'aid') aid_list_ = ph.get_plotdat(ax2, 'aid_list') index = aid_list_.index(aid_) annotation_bbox_list = ph.get_plotdat(ax2, 'annotation_bbox_list') bbox2 = annotation_bbox_list[index] print('bbox1 = %r' % (bbox1, )) print('bbox2 = %r' % (bbox2, )) vert_list1 = np.array(vt.verts_from_bbox(bbox1)) vert_list2 = np.array(vt.verts_from_bbox(bbox2)) print('vert_list1 = %r' % (vert_list1, )) print('vert_list2 = %r' % (vert_list2, )) #for vx in [0, 1, 2, 3]: for vx in [0, 1]: vert1 = vert_list1[vx].tolist() vert2 = vert_list2[vx].tolist() print(' ***') print(' * vert1 = %r' % (vert1, )) print(' * vert2 = %r' % (vert2, )) coordsA = coordsB = 'data' #coords = 'axes points' #'axes fraction' #'axes pixels' #coordsA = 'axes pixels' #coordsB = 'data' #'figure fraction' #'figure pixels' #'figure pixels' #'figure points' #'polar' #'offset points' con = mpl.patches.ConnectionPatch(xyA=vert1, xyB=vert2, coordsA=coordsA, coordsB=coordsB, axesA=ax1, axesB=ax2, linewidth=1, color='k') #, arrowstyle="-") #ut.embed() #con.set_zorder(None) ax1.add_artist(con) #ax2.add_artist(con) #ut.embed() #verts2.T[1] -= bbox2[-1] #bottom_left1, bottom_right1 = verts1[1:3].tolist() #bottom_left2, bottom_right2 = verts2[1:3].tolist() ##transAxes1 = ax1.transData.inverted() #transAxes1_fn = ax1.transData.transform #transAxes2_fn = ax2.transData.transform #transAxes1_fn = ut.identity #transAxes2_fn = ut.identity #coord_bl1 = transFigure.transform(transAxes1.transform(bottom_left1)) #coord_br1 = transFigure.transform(transAxes1.transform(bottom_right1)) #coord_bl1 = invTransFigure_fn1(transAxes1_fn(bottom_left1)) #print('bottom_left2 = %r' % (bottom_left2,)) #coord_bl1 = (5, 5) #coord_bl2 = invTransFigure_fn2(transAxes2_fn(bottom_left2)) #print('coord_bl2 = %r' % (coord_bl2,)) #coord_br1 = invTransFigure_fn1(transAxes1_fn(bottom_right1)) #coord_br2 = invTransFigure_fn2(transAxes2_fn(bottom_right2)) ##print('coord_bl1 = %r' % (coord_bl1,)) #line_coords1 = np.vstack([coord_bl1, coord_bl2]) #line_coords2 = np.vstack([coord_br1, coord_br2]) #print('line_coords1 = %r' % (line_coords1,)) #line1 = mpl.lines.Line2D((line_coords1[0]), (line_coords1[1]), transform=fig.transFigure) #line2 = mpl.lines.Line2D((line_coords2[0]), (line_coords2[1]), transform=fig.transFigure) #xs1, ys1 = line_coords1.T #xs2, ys2 = line_coords2.T #linekw = dict(transform=fig.transFigure) #linekw = dict() #print('xs1 = %r' % (xs1,)) #print('ys1 = %r' % (ys1,)) #line1 = mpl.lines.Line2D(xs1, ys1, **linekw) #line2 = mpl.lines.Line2D(xs2, ys2, **linekw) # NOQA #shrinkA=5, shrinkB=5, mutation_scale=20, fc="w") #ax2.add_artist(con) #fig.lines.append(line1) #fig.lines.append(line2) pass return fig
def show_multiple_chips(ibs, aid_list, in_image=True, fnum=0, sel_aids=[], subtitle='', annote=False, **kwargs): """ CommandLine: python -m ibeis.viz.viz_name --test-show_multiple_chips --show --no-inimage python -m ibeis.viz.viz_name --test-show_multiple_chips --show --db NNP_Master3 --aids=6435,9861,137,6563,9167,12547,9332,12598,13285 --no-inimage --notitle python -m ibeis.viz.viz_name --test-show_multiple_chips --show --db NNP_Master3 --aids=137,6563,12547,9332,12598,13285 --no-inimage --notitle --adjust=.05 python -m ibeis.viz.viz_name --test-show_multiple_chips --show --db NNP_Master3 --aids=6563,9332,13285,12598 --no-inimage --notitle --adjust=.05 --rc=1,4 python -m ibeis.viz.viz_name --test-show_multiple_chips --show --db PZ_Master0 --aids=1288 --no-inimage --notitle --adjust=.05 python -m ibeis.viz.viz_name --test-show_multiple_chips --show --db PZ_Master0 --aids=4020,4839 --no-inimage --notitle --adjust=.05 python -m ibeis.viz.viz_name --test-show_multiple_chips --db NNP_Master3 --aids=6524,6540,6571,6751 --no-inimage --notitle --adjust=.05 --diskshow python -m ibeis.viz.viz_name --test-show_multiple_chips --db PZ_MTEST -a default:index=0:4 --show --aids=1 --doboth --show --no-inimage python -m ibeis.viz.viz_name --test-show_multiple_chips --db PZ_MTEST --aids=1 --doboth --show --no-inimage python -m ibeis.viz.viz_name --test-show_multiple_chips --db PZ_MTEST --aids=1 --doboth --rc=2,1 --show --no-inimage python -m ibeis.viz.viz_name --test-show_multiple_chips --db PZ_MTEST --aids=1 --doboth --rc=2,1 --show --notitle --trydrawline --no-draw_lbls python -m ibeis.viz.viz_name --test-show_multiple_chips --db PZ_MTEST --aids=1,2 --doboth --show --notitle --trydrawline python -m ibeis.viz.viz_name --test-show_multiple_chips --db PZ_MTEST --aids=1,2,3,4,5 --doboth --rc=2,5 --show --chrlbl --trydrawline --qualtitle --no-figtitle --notitle --doboth --doboth --show python -m ibeis.viz.viz_name --test-show_multiple_chips --db NNP_Master3 --aids=15419 --doboth --rc=2,1 --show --notitle --trydrawline --no-draw_lbls Example: >>> # DISABLE_DOCTEST >>> from ibeis.viz.viz_name import * # NOQA >>> import ibeis >>> ibs, aid_list, in_image = testdata_multichips() >>> fnum = 0 >>> sel_aids = [] >>> subtitle = '' >>> annote = False >>> fig = show_multiple_chips(ibs, aid_list, in_image, fnum, sel_aids, subtitle, annote) >>> ut.quit_if_noshow() >>> fig.canvas.draw() >>> ut.show_if_requested() """ fnum = pt.ensure_fnum(fnum) nAids = len(aid_list) if nAids == 0: fig = df2.figure(fnum=fnum, pnum=(1, 1, 1), **kwargs) df2.imshow_null(fnum=fnum, **kwargs) return fig # Trigger computation of all chips in parallel ibsfuncs.ensure_annotation_data(ibs, aid_list, chips=(not in_image or annote), feats=annote) print('[viz_name] * annot_vuuid=%r' % ((ibs.get_annot_visual_uuids(aid_list),))) print('[viz_name] * aid_list=%r' % ((aid_list,))) DOBOTH = ut.get_argflag('--doboth') rc = ut.get_argval('--rc', type_=list, default=None) if rc is None: nRows, nCols = ph.get_square_row_cols(nAids * (2 if DOBOTH else 1)) else: nRows, nCols = rc notitle = ut.get_argflag('--notitle') draw_lbls = not ut.get_argflag('--no-draw_lbls') show_chip_kw = dict(annote=annote, in_image=in_image, notitle=notitle, draw_lbls=draw_lbls) #print('[viz_name] * r=%r, c=%r' % (nRows, nCols)) #gs2 = gridspec.GridSpec(nRows, nCols) pnum_ = df2.get_pnum_func(nRows, nCols) fig = df2.figure(fnum=fnum, pnum=pnum_(0), **kwargs) fig.clf() ax_list1 = [] for px, aid in enumerate(aid_list): print('px = %r' % (px,)) _fig, _ax1 = viz_chip.show_chip(ibs, aid=aid, pnum=pnum_(px), **show_chip_kw) print('other_aids = %r' % (ibs.get_annot_contact_aids(aid),)) ax = df2.gca() ax_list1.append(_ax1) if aid in sel_aids: df2.draw_border(ax, df2.GREEN, 4) if ut.get_argflag('--chrlbl') and not DOBOTH: ax.set_xlabel('(' + chr(ord('a') - 1 + px) + ')') elif ut.get_argflag('--numlbl') and not DOBOTH: ax.set_xlabel('(' + str(px + 1) + ')') #plot_aid3(ibs, aid) # HACK to show in image and not in image if DOBOTH: #ut.embed() #ph.get_plotdat_dict(ax_list1[1]) #ph.get_plotdat_dict(ax_list2[1]) ax_list2 = [] show_chip_kw['in_image'] = not show_chip_kw['in_image'] start = px + 1 for px, aid in enumerate(aid_list, start=start): _fig, _ax2 = viz_chip.show_chip(ibs, aid=aid, pnum=pnum_(px), **show_chip_kw) ax = df2.gca() ax_list2.append(_ax2) if ut.get_argflag('--chrlbl'): ax.set_xlabel('(' + chr(ord('a') - start + px) + ')') elif ut.get_argflag('--numlbl'): ax.set_xlabel('(' + str(px - start + 1) + ')') if ut.get_argflag('--qualtitle'): qualtext = ibs.get_annot_quality_texts(aid) ax.set_title(qualtext) if aid in sel_aids: df2.draw_border(ax, df2.GREEN, 4) if in_image: ax_list1, ax_list2 = ax_list2, ax_list1 if ut.get_argflag('--trydrawline'): # Unfinished #ut.embed() # Draw lines between corresponding axes # References: # http://stackoverflow.com/questions/17543359/drawing-lines-between-two-plots-in-matplotlib import matplotlib as mpl import vtool as vt # !!! #http://matplotlib.org/users/transforms_tutorial.html #invTransFigure_fn1 = fig.transFigure.inverted().transform #invTransFigure_fn2 = fig.transFigure.inverted().transform #print(ax_list1) #print(ax_list2) assert len(ax_list1) == len(ax_list2) for ax1, ax2 in zip(ax_list1, ax_list2): #_ = ax1.get_window_extent().transformed(fig.dpi_scale_trans.inverted()) #bbox1 = (0, 0, _.width * fig.dpi, _.height * fig.dpi) # returns in figure coordinates #bbox1 = df2.get_axis_bbox(ax=ax1) #if bbox1[-1] < 0: # # Weird bug # bbox1 = bbox1[1] print('--') print('ax1 = %r' % (ax1,)) print('ax2 = %r' % (ax2,)) chipshape = ph.get_plotdat(ax1, 'chipshape') #_bbox1 = ax1.get_window_extent().transformed(fig.dpi_scale_trans.inverted()) #bbox1 = (0, 0, _bbox1.width * fig.dpi, _bbox1.height * fig.dpi) bbox1 = (0, 0, chipshape[1], chipshape[0]) aid_ = ph.get_plotdat(ax2, 'aid') aid_list_ = ph.get_plotdat(ax2, 'aid_list') index = aid_list_.index(aid_) annotation_bbox_list = ph.get_plotdat(ax2, 'annotation_bbox_list') bbox2 = annotation_bbox_list[index] print('bbox1 = %r' % (bbox1,)) print('bbox2 = %r' % (bbox2,)) vert_list1 = np.array(vt.verts_from_bbox(bbox1)) vert_list2 = np.array(vt.verts_from_bbox(bbox2)) print('vert_list1 = %r' % (vert_list1,)) print('vert_list2 = %r' % (vert_list2,)) #for vx in [0, 1, 2, 3]: for vx in [0, 1]: vert1 = vert_list1[vx].tolist() vert2 = vert_list2[vx].tolist() print(' ***') print(' * vert1 = %r' % (vert1,)) print(' * vert2 = %r' % (vert2,)) coordsA = coordsB = 'data' #coords = 'axes points' #'axes fraction' #'axes pixels' #coordsA = 'axes pixels' #coordsB = 'data' #'figure fraction' #'figure pixels' #'figure pixels' #'figure points' #'polar' #'offset points' con = mpl.patches.ConnectionPatch( xyA=vert1, xyB=vert2, coordsA=coordsA, coordsB=coordsB, axesA=ax1, axesB=ax2, linewidth=1, color='k') #, arrowstyle="-") #ut.embed() #con.set_zorder(None) ax1.add_artist(con) #ax2.add_artist(con) #ut.embed() #verts2.T[1] -= bbox2[-1] #bottom_left1, bottom_right1 = verts1[1:3].tolist() #bottom_left2, bottom_right2 = verts2[1:3].tolist() ##transAxes1 = ax1.transData.inverted() #transAxes1_fn = ax1.transData.transform #transAxes2_fn = ax2.transData.transform #transAxes1_fn = ut.identity #transAxes2_fn = ut.identity #coord_bl1 = transFigure.transform(transAxes1.transform(bottom_left1)) #coord_br1 = transFigure.transform(transAxes1.transform(bottom_right1)) #coord_bl1 = invTransFigure_fn1(transAxes1_fn(bottom_left1)) #print('bottom_left2 = %r' % (bottom_left2,)) #coord_bl1 = (5, 5) #coord_bl2 = invTransFigure_fn2(transAxes2_fn(bottom_left2)) #print('coord_bl2 = %r' % (coord_bl2,)) #coord_br1 = invTransFigure_fn1(transAxes1_fn(bottom_right1)) #coord_br2 = invTransFigure_fn2(transAxes2_fn(bottom_right2)) ##print('coord_bl1 = %r' % (coord_bl1,)) #line_coords1 = np.vstack([coord_bl1, coord_bl2]) #line_coords2 = np.vstack([coord_br1, coord_br2]) #print('line_coords1 = %r' % (line_coords1,)) #line1 = mpl.lines.Line2D((line_coords1[0]), (line_coords1[1]), transform=fig.transFigure) #line2 = mpl.lines.Line2D((line_coords2[0]), (line_coords2[1]), transform=fig.transFigure) #xs1, ys1 = line_coords1.T #xs2, ys2 = line_coords2.T #linekw = dict(transform=fig.transFigure) #linekw = dict() #print('xs1 = %r' % (xs1,)) #print('ys1 = %r' % (ys1,)) #line1 = mpl.lines.Line2D(xs1, ys1, **linekw) #line2 = mpl.lines.Line2D(xs2, ys2, **linekw) # NOQA #shrinkA=5, shrinkB=5, mutation_scale=20, fc="w") #ax2.add_artist(con) #fig.lines.append(line1) #fig.lines.append(line2) pass return fig
def plot_chip(self, aid, nRows, nCols, px, fulldraw=True, **kwargs): """ Plots an individual chip in a subaxis """ ibs = self.ibs if aid in [self.aid1, self.aid2]: # Bold color for the matching chips lw = 5 text_color = np.array((135, 206, 235, 255)) / 255.0 else: lw = 2 text_color = None pnum = (nRows, nCols, px) if not fulldraw: # not doing full draw so we have to clear any axes # that are here already manually ax = self.fig.add_subplot(*pnum) self.clear_parent_axes(ax) #ut.embed() #print(subax) viz_chip_kw = { 'fnum': self.fnum, 'pnum': pnum, 'nokpts': True, 'show_name': True, 'show_gname': False, 'show_aidstr': True, 'notitle': True, 'show_num_gt': False, 'text_color': text_color, } if False and ut.is_developer(): enable_chip_title_prefix = True viz_chip_kw.update({ 'enable_chip_title_prefix': enable_chip_title_prefix, 'show_name': True, 'show_aidstr': True, 'show_viewcode': True, 'show_num_gt': True, 'show_quality_text': True, }) viz_chip.show_chip(ibs, aid, **viz_chip_kw) ax = pt.gca() pt.draw_border(ax, color=kwargs.get('color'), lw=lw) if kwargs.get('make_buttons', True): #divider = pt.ensure_divider(ax) butkw = { #'divider': divider, 'ax': ax, 'size': '13%' #'size': '15%' } # Chip matching/naming options nid = ibs.get_annot_name_rowids(aid) annotation_unknown = ibs.is_nid_unknown([nid])[0] if not annotation_unknown: # remove name callback = functools.partial(self.unname_annotation, aid) self.append_button('remove name (' + ibs.get_name_texts(nid) + ')', callback=callback, **butkw) else: # new name callback = functools.partial(self.mark_annotation_as_new_name, aid) self.append_button('mark as new name', callback=callback, **butkw) if nid != self.nid2 and not ibs.is_nid_unknown( [self.nid2])[0] and not self.is_split_case: # match to nid2 callback = functools.partial(self.rename_annotation, aid, self.nid2) text = 'match to name2: ' + ibs.get_name_texts(self.nid2) self.append_button(text, callback=callback, **butkw) if nid != self.nid1 and not ibs.is_nid_unknown([self.nid1])[0]: # match to nid1 callback = functools.partial(self.rename_annotation, aid, self.nid1) text = 'match to name1: ' + ibs.get_name_texts(self.nid1) self.append_button(text, callback=callback, **butkw) other_nid_list = self.get_other_nids() for other_nid in other_nid_list: if other_nid == nid: continue # rename nid2 callback = functools.partial(self.rename_annotation, aid, other_nid) text = 'match to: ' + ibs.get_name_texts(other_nid) self.append_button(text, callback=callback, **butkw) return ax
def plot_chip(self, aid, nRows, nCols, px, fulldraw=True, **kwargs): """ Plots an individual chip in a subaxis """ ibs = self.ibs if aid in [self.aid1, self.aid2]: # Bold color for the matching chips lw = 5 text_color = np.array((135, 206, 235, 255)) / 255.0 else: lw = 2 text_color = None pnum = (nRows, nCols, px) if not fulldraw: # not doing full draw so we have to clear any axes # that are here already manually ax = self.fig.add_subplot(*pnum) self.clear_parent_axes(ax) #ut.embed() #print(subax) viz_chip_kw = { 'fnum': self.fnum, 'pnum': pnum, 'nokpts': True, 'show_name': True, 'show_gname': False, 'show_aidstr': True, 'notitle': True, 'show_num_gt': False, 'text_color': text_color, } if False and ut.is_developer(): enable_chip_title_prefix = True viz_chip_kw.update( { 'enable_chip_title_prefix': enable_chip_title_prefix, 'show_name': True, 'show_aidstr': True, 'show_yawtext': True, 'show_num_gt': True, 'show_quality_text': True, } ) viz_chip.show_chip(ibs, aid, **viz_chip_kw) ax = pt.gca() pt.draw_border(ax, color=kwargs.get('color'), lw=lw) if kwargs.get('make_buttons', True): #divider = pt.ensure_divider(ax) butkw = { #'divider': divider, 'ax': ax, 'size': '13%' #'size': '15%' } # Chip matching/naming options nid = ibs.get_annot_name_rowids(aid) annotation_unknown = ibs.is_nid_unknown([nid])[0] if not annotation_unknown: # remove name callback = functools.partial(self.unname_annotation, aid) self.append_button('remove name (' + ibs.get_name_texts(nid) + ')', callback=callback, **butkw) else: # new name callback = functools.partial(self.mark_annotation_as_new_name, aid) self.append_button('mark as new name', callback=callback, **butkw) if nid != self.nid2 and not ibs.is_nid_unknown([self.nid2])[0] and not self.is_split_case: # match to nid2 callback = functools.partial(self.rename_annotation, aid, self.nid2) text = 'match to name2: ' + ibs.get_name_texts(self.nid2) self.append_button(text, callback=callback, **butkw) if nid != self.nid1 and not ibs.is_nid_unknown([self.nid1])[0]: # match to nid1 callback = functools.partial(self.rename_annotation, aid, self.nid1) text = 'match to name1: ' + ibs.get_name_texts(self.nid1) self.append_button(text, callback=callback, **butkw) other_nid_list = self.get_other_nids() for other_nid in other_nid_list: if other_nid == nid: continue # rename nid2 callback = functools.partial(self.rename_annotation, aid, other_nid) text = 'match to: ' + ibs.get_name_texts(other_nid) self.append_button(text, callback=callback, **butkw) return ax
def plot_chip(self, aid, nRows, nCols, px, **kwargs): """ Plots an individual chip in a subaxis """ ibs = self.ibs enable_chip_title_prefix = ut.is_developer() #enable_chip_title_prefix = False if aid in self.comp_aids: score = self.cm.get_annot_scores([aid])[0] rawscore = self.cm.get_annot_scores([aid])[0] title_suf = kwargs.get('title_suffix', '') if score != rawscore: if score is None: title_suf += '\n score=____' else: title_suf += '\n score=%0.2f' % score title_suf += '\n rawscore=%0.2f' % rawscore else: title_suf = kwargs.get('title_suffix', '') if enable_chip_title_prefix: title_suf = '\n' + title_suf #nid = ibs.get_annot_name_rowids(aid) viz_chip_kw = { 'fnum': self.fnum, 'pnum': (nRows, nCols, px), 'nokpts': True, 'show_gname': False, 'show_exemplar': False, 'show_num_gt': False, 'show_gname': False, 'title_suffix': title_suf, # 'text_color': kwargs.get('color'), ### #'show_name': False, #'show_aidstr': False, 'enable_chip_title_prefix': enable_chip_title_prefix, 'show_name': True, 'show_aidstr': True, 'show_yawtext': True, 'show_quality_text': True, } viz_chip.show_chip(ibs, aid, **viz_chip_kw) ax = pt.gca() if kwargs.get('make_buttons', True): divider = pt.ensure_divider(ax) butkw = { 'divider': divider, 'size': '13%' } self.aid2_ax = {} self.aid2_border = {} if aid in self.comp_aids: callback = partial(self.select, aid) self.append_button('Select This Animal', callback=callback, **butkw) #Hack to toggle colors if aid in self.aid_checkbox_states: #If we are selecting it, then make it green, otherwise change it back to grey if self.aid_checkbox_states[aid]: border = pt.draw_border(ax, color=(0, 1, 0), lw=4) else: border = pt.draw_border(ax, color=(.7, .7, .7), lw=4) self.aid2_border[aid] = border else: self.aid_checkbox_states[aid] = False self.append_button('Examine', callback=partial(self.examine, aid), **butkw)
def plot_chip_metric(ibs, aid, metric=None, fnum=1, lbl='', figtitle='', colortype='score', darken=.5, cmap_='hot', reverse_cmap=False, **kwargs): """ Plots one annotation with one metric. The word metric is used liberally. Example: >>> from ibeis.algo.hots.smk.smk_plots import * # NOQA >>> from ibeis.algo.hots.smk import smk_debug >>> from ibeis.algo.hots.smk import smk_plots >>> from ibeis.algo.hots.smk import smk_repr >>> #tup = smk_debug.testdata_raw_internals0(db='GZ_ALL', nWords=64000) >>> #tup = smk_debug.testdata_raw_internals0(db='GZ_ALL', nWords=8000) >>> #tup = smk_debug.testdata_raw_internals0(db='PZ_Master0', nWords=64000) >>> tup = smk_debug.testdata_raw_internals0(db='PZ_Mothers', nWords=8000) >>> ibs, annots_df, daids, qaids, invindex, qreq_ = tup >>> smk_repr.compute_data_internals_(invindex, qreq_.qparams, delete_rawvecs=False) >>> invindex.idx2_wxs = np.array(invindex.idx2_wxs) >>> metric = None >>> aid = 1 >>> fnum = 0 >>> lbl='test' >>> colortype='score' >>> kwargs = {'annote': False} #>>> df2.rrr() >>> smk_plots.plot_chip_metric(ibs, aid, metric, fnum, lbl, colortype, **kwargs) >>> df2.present() """ import plottool.draw_func2 as df2 from ibeis.viz import viz_chip df2.figure(fnum=fnum, doclf=True, docla=True) if metric is not None: if colortype == 'score': colors = df2.scores_to_color(metric, cmap_=cmap_, reverse_cmap=reverse_cmap) elif colortype == 'label': colors = df2.label_to_colors(metric) elif colortype == 'custom': # Give ranks of -1 and -2 special meaning val2_customcolor = { -1: df2.UNKNOWN_PURP, -2: df2.LIGHT_BLUE, } # Inconsistent but visable colors scale_max = .7 #consistent colors (needs to know highest K) #maxval = np.array(metric).max() #scale_max = .7 * (float(maxval) / 20.0) colors = df2.scores_to_color(metric, cmap_=cmap_, reverse_cmap=reverse_cmap, scale_max=scale_max, val2_customcolor=val2_customcolor) else: raise ValueError('no known colortype = %r' % (colortype, )) else: colors = 'distinct' viz_chip.show_chip( ibs, aid, color=colors, darken=darken, ell_alpha=.8, #ell_linewidth=4, ell_linewidth=2, **kwargs) df2.set_figtitle(figtitle) if metric is not None: cb = df2.colorbar(metric, colors, custom=(colortype == 'custom')) cb.set_label(lbl)
def plot_chip(self, aid, nRows, nCols, px, **kwargs): """ Plots an individual chip in a subaxis """ ibs = self.ibs enable_chip_title_prefix = ut.is_developer() #enable_chip_title_prefix = False if aid in self.comp_aids: score = self.cm.get_annot_scores([aid])[0] rawscore = self.cm.get_annot_scores([aid])[0] title_suf = kwargs.get('title_suffix', '') if score != rawscore: if score is None: title_suf += '\n score=____' else: title_suf += '\n score=%0.2f' % score title_suf += '\n rawscore=%0.2f' % rawscore else: title_suf = kwargs.get('title_suffix', '') if enable_chip_title_prefix: title_suf = '\n' + title_suf #nid = ibs.get_annot_name_rowids(aid) viz_chip_kw = { 'fnum': self.fnum, 'pnum': (nRows, nCols, px), 'nokpts': True, 'show_gname': False, 'show_exemplar': False, 'show_num_gt': False, 'show_gname': False, 'title_suffix': title_suf, # 'text_color': kwargs.get('color'), ### #'show_name': False, #'show_aidstr': False, 'enable_chip_title_prefix': enable_chip_title_prefix, 'show_name': True, 'show_aidstr': True, 'show_yawtext': True, 'show_quality_text': True, } viz_chip.show_chip(ibs, aid, **viz_chip_kw) ax = pt.gca() if kwargs.get('make_buttons', True): divider = pt.ensure_divider(ax) butkw = {'divider': divider, 'size': '13%'} self.aid2_ax = {} self.aid2_border = {} if aid in self.comp_aids: callback = partial(self.select, aid) self.append_button('Select This Animal', callback=callback, **butkw) #Hack to toggle colors if aid in self.aid_checkbox_states: #If we are selecting it, then make it green, otherwise change it back to grey if self.aid_checkbox_states[aid]: border = pt.draw_border(ax, color=(0, 1, 0), lw=4) else: border = pt.draw_border(ax, color=(.7, .7, .7), lw=4) self.aid2_border[aid] = border else: self.aid_checkbox_states[aid] = False self.append_button('Examine', callback=partial(self.examine, aid), **butkw)