def test_expand_path(h5_stack_dir):
expansions = [Path(p) for p in DatasetInfo.expand_path(os.path.join(h5_stack_dir, "*"))]
expected_file_paths = [
Path(h5_stack_dir) / "2d_apoptotic_binary_0.h5",
Path(h5_stack_dir) / "2d_apoptotic_binary_1.h5",
Path(h5_stack_dir) / "2d_apoptotic_binary_2.h5",
]
assert expansions == expected_file_paths
expected_dataset_paths = [Path(fp) / "volume/data" for fp in expected_file_paths]
expansions = [Path(p) for p in DatasetInfo.expand_path(os.path.join(h5_stack_dir, "*.h5", "vol*"))]
assert expansions == expected_dataset_paths
expansions = [Path(p) for p in DatasetInfo.expand_path(os.path.join(h5_stack_dir, "2d_apoptotic_binary_1.h5"))]
assert expansions == expected_file_paths[1:2]
relative_paths = ["2d_apoptotic_binary_0.h5", "2d_apoptotic_binary_1.h5", "2d_apoptotic_binary_2.h5"]
relative_paths_with_colon = os.path.pathsep.join(relative_paths)
expansions = [Path(p) for p in DatasetInfo.expand_path(relative_paths_with_colon, cwd=h5_stack_dir)]
assert expansions == expected_file_paths
def test_create_nickname_for_single_file_does_not_contain_extension(
h5_colon_path_stack):
expanded_paths = DatasetInfo.expand_path(h5_colon_path_stack)
nickname = DatasetInfo.create_nickname(expanded_paths[0:1])
assert nickname == "2d_apoptotic_binary_0"
def test_create_nickname(h5_colon_path_stack):
expanded_paths = DatasetInfo.expand_path(h5_colon_path_stack)
nickname = DatasetInfo.create_nickname(expanded_paths)
assert nickname == "2d_apoptotic_binary_"
def test_create_nickname_with_internal_paths(
h5_colon_path_stack_with_inner_paths):
expanded_paths = DatasetInfo.expand_path(
h5_colon_path_stack_with_inner_paths)
nickname = DatasetInfo.create_nickname(expanded_paths)
assert nickname == "2d_apoptotic_binary_-volume-data"