def publish(self,
pid=None,
id_=None,
user_id=None,
sip_agent=None,
spam_check=True):
"""Publish the Zenodo deposit."""
self['owners'] = self['_deposit']['owners']
self.validate_publish()
if spam_check:
self.spam_check()
is_first_publishing = not self.is_published()
deposit = super(ZenodoDeposit, self).publish(pid, id_)
recid, record = deposit.fetch_published()
pv = PIDVersioning(child=recid)
is_new_version = pv.children.count() > 1
# a) Fetch the last SIP from the previous version if it's a new version
# b) Fetch the previous SIP if publishing the metadata edit
if is_new_version or (not is_first_publishing):
if is_new_version:
sip_recid = pv.children.all()[-2]
else: # (not is_first_publishing)
sip_recid = recid
# Get the last SIP of the relevant recid, i.e.: either last
# version or the current one
sip_patch_of = (db.session.query(SIPModel).join(
RecordSIPModel, RecordSIPModel.sip_id == SIPModel.id).filter(
RecordSIPModel.pid_id == sip_recid.id).order_by(
SIPModel.created.desc()).first())
else:
sip_patch_of = None
recordsip = RecordSIP.create(recid,
record,
archivable=True,
create_sip_files=is_first_publishing,
user_id=user_id,
agent=sip_agent)
archiver = BagItArchiver(
recordsip.sip,
include_all_previous=(not is_first_publishing),
patch_of=sip_patch_of)
archiver.save_bagit_metadata()
return deposit
def publish(self, pid=None, id_=None, user_id=None, sip_agent=None):
"""Publish the Zenodo deposit."""
self['owners'] = self['_deposit']['owners']
self.validate_publish()
is_first_publishing = not self.is_published()
deposit = super(ZenodoDeposit, self).publish(pid, id_)
recid, record = deposit.fetch_published()
pv = PIDVersioning(child=recid)
is_new_version = pv.children.count() > 1
# a) Fetch the last SIP from the previous version if it's a new version
# b) Fetch the previous SIP if publishing the metadata edit
if is_new_version or (not is_first_publishing):
if is_new_version:
sip_recid = pv.children.all()[-2]
else: # (not is_first_publishing)
sip_recid = recid
# Get the last SIP of the relevant recid, i.e.: either last
# version or the current one
sip_patch_of = (
db.session.query(SIPModel)
.join(RecordSIPModel, RecordSIPModel.sip_id == SIPModel.id)
.filter(RecordSIPModel.pid_id == sip_recid.id)
.order_by(SIPModel.created.desc())
.first()
)
else:
sip_patch_of = None
recordsip = RecordSIP.create(
recid, record, archivable=True,
create_sip_files=is_first_publishing, user_id=user_id,
agent=sip_agent)
archiver = BagItArchiver(
recordsip.sip, include_all_previous=(not is_first_publishing),
patch_of=sip_patch_of)
archiver.save_bagit_metadata()
return deposit
def test_save_bagit_metadata(sips):
"""Test saving of bagit metadata."""
sip = sips[0]
assert not BagItArchiver.get_bagit_metadata(sip)
archiver = BagItArchiver(sip)
archiver.save_bagit_metadata()
bmeta = BagItArchiver.get_bagit_metadata(sip, as_dict=True)
file_m = next(f for f in bmeta['files'] if 'sipfilepath' in f)
assert file_m['sipfilepath'] == 'foobar.txt'
assert file_m['filepath'] == 'data/files/foobar.txt'
sip.model.sip_files[0].filepath = 'changed.txt'
with pytest.raises(Exception) as excinfo:
archiver.save_bagit_metadata()
assert 'Attempting to save' in str(excinfo.value)
archiver.save_bagit_metadata(overwrite=True)
bmeta = BagItArchiver.get_bagit_metadata(sip, as_dict=True)
file_m = next(f for f in bmeta['files'] if 'sipfilepath' in f)
assert file_m['sipfilepath'] == 'changed.txt'
assert file_m['filepath'] == 'data/files/changed.txt'