def onPlotOnlyTimer(self, e):
if self.terminated:
self.stop_run()
else:
if self.results_file is not None and os.path.isfile(
self.results_file):
st = time.time()
with open(self.results_file, 'r') as rf:
rf.seek(self.bookmark)
split_info = [
i.replace('\n', '').split(' ') for i in rf.readlines()
]
self.bookmark = rf.tell()
if self.args.reorder:
idx_offset = len(self.spotfinding_info)
new_info = [[
split_info.index(i) + idx_offset,
int(i[1]), i[2], i[3],
tuple(i[4:10])
] if len(i) > 5 else [
split_info.index(i) + idx_offset,
int(i[1]), i[2],
misc.makenone(i[3]),
misc.makenone(i[4])
] for i in split_info]
else:
new_info = [
[int(i[0]),
int(i[1]), i[2], i[3],
tuple(i[4:10])] if len(i) > 5 else [
int(i[0]),
int(i[1]), i[2],
misc.makenone(i[3]),
misc.makenone(i[4])
] for i in split_info
]
if len(new_info) > 0:
self.msg = 'Tracking new images in {} ...'.format(
self.results_file)
self.spotfinding_info.extend(new_info)
if len(self.spotfinding_info) > 0:
indexed = [
i for i in self.spotfinding_info
if i[4] is not None
]
self.tracker_panel.idx_count_txt.SetLabel(
str(len(indexed)))
self.plot_results()
else:
self.msg = 'Waiting for new images in {} ...'.format(
self.results_file)
else:
self.msg = 'Waiting for new run to initiate...'
self.update_spinner()
def onProcTimer(self, e):
if os.path.isfile(self.results_file):
with open(self.results_file, 'r') as rf:
rf.seek(self.bookmark)
split_info = [
i.replace('\n', '').split(' ') for i in rf.readlines()
]
self.bookmark = rf.tell()
if self.reorder:
idx_offset = len(self.spotfinding_info)
new_info = [[
split_info.index(i) + idx_offset,
int(i[1]), i[2], i[3],
tuple(i[4:10])
] if len(i) > 5 else [
split_info.index(i) + idx_offset,
int(i[1]), i[2],
misc.makenone(i[3]),
misc.makenone(i[4])
] for i in split_info]
else:
new_info = [[int(i[0]),
int(i[1]), i[2], i[3],
tuple(i[4:10])] if len(i) > 5 else [
int(i[0]),
int(i[1]), i[2],
misc.makenone(i[3]),
misc.makenone(i[4])
] for i in split_info]
if len(new_info) > 0:
self.spotfinding_info.extend(new_info)
if len(self.spotfinding_info) > 0:
self.msg = 'Tracking new images in {} ...'.format(
self.results_file)
else:
self.msg = 'Waiting for new images in {} ...'.format(
self.results_file)
else:
self.msg = 'Waiting for new run to initiate...'
info = [self.msg, self.spotfinding_info, self.cluster_info]
evt = SpotFinderOneDone(tp_EVT_SPFDONE, -1, info=info)
wx.PostEvent(self.parent, evt)