def test_files_in_command(self, mock_retrieve_call, mock_os_mkdir, mock_isdir):
def new_retrieve(arg1):
return {
'files1_out': ['/test/file1/foo.txt', '/test/file1/bar.txt'],
}
mock_retrieve_call.side_effect = new_retrieve
job_interface_dict, job_data_dict, job_environment_dict = self._get_simple_interface_data_env()
job_interface_dict['command_arguments'] = '${files1}'
job_interface_dict['input_data'] = [{
'name': 'files1',
'type': 'files',
'required': True,
}]
job_data_dict['input_data'].append({
'name': 'files1',
'file_ids': [1, 2, 3],
})
job_data_dict['output_data'].append({
'name': 'files1_out',
'workspace_id': self.workspace.id,
})
job_interface = JobInterface(job_interface_dict)
job_data = JobData(job_data_dict)
job_environment = job_environment_dict
job_exe_id = 1
job_interface.perform_pre_steps(job_data, job_environment)
job_command_arguments = job_interface.fully_populate_command_argument(job_data, job_environment, job_exe_id)
expected_command_arguments = os.path.join(SCALE_JOB_EXE_INPUT_PATH, 'files1')
self.assertEqual(job_command_arguments, expected_command_arguments,
'expected a different command from pre_steps')
def test_file_in_command(self, mock_retrieve_call, mock_os_mkdir, mock_get_one_file, mock_setup_upload):
job_work_dir = "/test"
job_exe_id = 1
job_input_dir = get_job_exe_input_data_dir(job_exe_id)
job_output_dir = os.path.join(job_work_dir, u'outputs')
def new_retrieve(arg1, arg2, arg3):
return {u'file1_out': [input_file_path]}
input_file_path = os.path.join(job_input_dir, 'file1', 'foo.txt')
mock_retrieve_call.side_effect = new_retrieve
mock_get_one_file.side_effect = lambda(arg1): input_file_path
job_interface_dict, job_data_dict, job_environment_dict = self._get_simple_interface_data_env()
job_interface_dict[u'command_arguments'] = u'${file1}'
job_interface_dict[u'input_data'] = [{u'name' : u'file1', u'type' : u'file', 'required' : True}]
job_data_dict[u'input_data'].append({u'name': u'file1', u'file_id': 1})
job_data_dict[u'output_data'].append({u'name': u'file1_out', u'workspace_id': self.workspace.id})
job_interface = JobInterface(job_interface_dict)
job_data = JobData(job_data_dict)
job_environment = JobEnvironment(job_environment_dict)
job_interface.perform_pre_steps(job_data, job_environment, job_exe_id)
job_command_arguments = job_interface.fully_populate_command_argument(job_data, job_environment, job_exe_id)
self.assertEqual(job_command_arguments, input_file_path, u'expected a different command from pre_steps')
mock_setup_upload.assert_called_once_with(get_job_exe_output_data_dir(job_exe_id), get_job_exe_output_work_dir(job_exe_id), self.workspace)
def test_file_in_command(self, mock_retrieve_call, mock_os_mkdir, mock_get_one_file, mock_isdir):
job_exe_id = 1
def new_retrieve(arg1):
return {
'file1_out': [input_file_path],
}
input_file_path = os.path.join(SCALE_JOB_EXE_INPUT_PATH, 'file1', 'foo.txt')
mock_retrieve_call.side_effect = new_retrieve
mock_get_one_file.side_effect = lambda (arg1): input_file_path
job_interface_dict, job_data_dict, job_environment_dict = self._get_simple_interface_data_env()
job_interface_dict['command_arguments'] = '${file1}'
job_interface_dict['input_data'] = [{
'name': 'file1',
'type': 'file',
'required': True,
}]
job_data_dict['input_data'].append({
'name': 'file1',
'file_id': self.file.id,
})
job_data_dict['output_data'].append({
'name': 'file1_out',
'workspace_id': self.workspace.id,
})
job_interface = JobInterface(job_interface_dict)
job_data = JobData(job_data_dict)
job_environment = job_environment_dict
job_interface.perform_pre_steps(job_data, job_environment)
job_command_arguments = job_interface.fully_populate_command_argument(job_data, job_environment, job_exe_id)
self.assertEqual(job_command_arguments, input_file_path, 'expected a different command from pre_steps')
def test_files_in_command(self, mock_retrieve_call, mock_os_mkdir):
def new_retrieve(arg1):
return {
'files1_out': ['/test/file1/foo.txt', '/test/file1/bar.txt'],
}
mock_retrieve_call.side_effect = new_retrieve
job_interface_dict, job_data_dict, job_environment_dict = self._get_simple_interface_data_env()
job_interface_dict['command_arguments'] = '${files1}'
job_interface_dict['input_data'] = [{
'name': 'files1',
'type': 'files',
'required': True,
}]
job_data_dict['input_data'].append({
'name': 'files1',
'file_ids': [1, 2, 3],
})
job_data_dict['output_data'].append({
'name': 'files1_out',
'workspace_id': self.workspace.id,
})
job_interface = JobInterface(job_interface_dict)
job_data = JobData(job_data_dict)
job_environment = JobEnvironment(job_environment_dict)
job_exe_id = 1
job_interface.perform_pre_steps(job_data, job_environment)
job_command_arguments = job_interface.fully_populate_command_argument(job_data, job_environment, job_exe_id)
expected_command_arguments = os.path.join(SCALE_JOB_EXE_INPUT_PATH, 'files1')
self.assertEqual(job_command_arguments, expected_command_arguments,
'expected a different command from pre_steps')
def test_file_in_command(self, mock_retrieve_call, mock_os_mkdir, mock_get_one_file):
job_exe_id = 1
def new_retrieve(arg1):
return {
'file1_out': [input_file_path],
}
input_file_path = os.path.join(SCALE_JOB_EXE_INPUT_PATH, 'file1', 'foo.txt')
mock_retrieve_call.side_effect = new_retrieve
mock_get_one_file.side_effect = lambda(arg1): input_file_path
job_interface_dict, job_data_dict, job_environment_dict = self._get_simple_interface_data_env()
job_interface_dict['command_arguments'] = '${file1}'
job_interface_dict['input_data'] = [{
'name': 'file1',
'type': 'file',
'required': True,
}]
job_data_dict['input_data'].append({
'name': 'file1',
'file_id': self.file.id,
})
job_data_dict['output_data'].append({
'name': 'file1_out',
'workspace_id': self.workspace.id,
})
job_interface = JobInterface(job_interface_dict)
job_data = JobData(job_data_dict)
job_environment = JobEnvironment(job_environment_dict)
job_interface.perform_pre_steps(job_data, job_environment)
job_command_arguments = job_interface.fully_populate_command_argument(job_data, job_environment, job_exe_id)
self.assertEqual(job_command_arguments, input_file_path, 'expected a different command from pre_steps')
def test_simple_case(self):
job_interface_dict, job_data_dict, job_environment_dict = self._get_simple_interface_data_env()
job_interface = JobInterface(job_interface_dict)
job_data = JobData(job_data_dict)
job_environment = job_environment_dict
job_exe_id = 1
job_interface.perform_pre_steps(job_data, job_environment)
job_command_arguments = job_interface.fully_populate_command_argument(job_data, job_environment, job_exe_id)
self.assertEqual(job_command_arguments, '', 'expected a different command from pre_steps')
def test_simple_case(self):
job_interface_dict, job_data_dict, job_environment_dict = self._get_simple_interface_data_env()
job_interface = JobInterface(job_interface_dict)
job_data = JobData(job_data_dict)
job_environment = JobEnvironment(job_environment_dict)
job_exe_id = 1
job_interface.perform_pre_steps(job_data, job_environment, 1)
job_command_arguments = job_interface.fully_populate_command_argument(job_data, job_environment, job_exe_id)
self.assertEqual(job_command_arguments, '', 'expected a different command from pre_steps')
def test_output_dir_in_command(self):
job_interface_dict, job_data_dict, job_environment_dict = self._get_simple_interface_data_env()
job_interface_dict['command_arguments'] = '${job_output_dir}'
job_interface = JobInterface(job_interface_dict)
job_data = JobData(job_data_dict)
job_environment = job_environment_dict
job_exe_id = 1
job_output_dir = SCALE_JOB_EXE_OUTPUT_PATH
job_interface.perform_pre_steps(job_data, job_environment)
job_command_arguments = job_interface.fully_populate_command_argument(job_data, job_environment, job_exe_id)
self.assertEqual(job_command_arguments, job_output_dir, 'expected a different command from pre_steps')
def test_output_dir_in_command(self):
job_interface_dict, job_data_dict, job_environment_dict = self._get_simple_interface_data_env()
job_interface_dict['command_arguments'] = '${job_output_dir}'
job_interface = JobInterface(job_interface_dict)
job_data = JobData(job_data_dict)
job_environment = JobEnvironment(job_environment_dict)
job_exe_id = 1
job_output_dir = file_system.get_job_exe_output_data_dir(job_exe_id)
job_interface.perform_pre_steps(job_data, job_environment, 1)
job_command_arguments = job_interface.fully_populate_command_argument(job_data, job_environment, job_exe_id)
self.assertEqual(job_command_arguments, job_output_dir, 'expected a different command from pre_steps')
def test_complex_command(self):
job_interface_dict, job_data_dict, job_environment_dict = self._get_simple_interface_data_env()
job_interface_dict[u'command_arguments'] = u'${-f :prop1}'
job_interface_dict[u'input_data'] = [{u'name' : u'prop1', u'type' : u'property', 'required' : True}]
job_data_dict[u'input_data'].append({u'name': u'prop1', u'value': u'property-value'})
job_interface = JobInterface(job_interface_dict)
job_data = JobData(job_data_dict)
job_environment = JobEnvironment(job_environment_dict)
job_work_dir = "/test"
job_exe_id = 1
job_interface.perform_pre_steps(job_data, job_environment, 1)
job_command_arguments = job_interface.fully_populate_command_argument(job_data, job_environment, job_exe_id)
self.assertEqual(job_command_arguments, u'-f property-value', u'expected a different command from pre_steps')
def test_absent_optional_files_in_command(self):
job_interface_dict, job_data_dict, job_environment_dict = self._get_simple_interface_data_env()
job_interface_dict['command_arguments'] = '${input_files}'
job_interface_dict['input_data'] = [{
'name': 'input_files',
'type': 'files',
'required': False,
}]
job_interface = JobInterface(job_interface_dict)
job_data = JobData(job_data_dict)
job_environment = job_environment_dict
job_exe_id = 1
job_interface.perform_pre_steps(job_data, job_environment)
job_command_arguments = job_interface.fully_populate_command_argument(job_data, job_environment, job_exe_id)
self.assertEqual(job_command_arguments, '', 'expected a different command from pre_steps')
def test_absent_required_files_in_command(self):
job_interface_dict, job_data_dict, job_environment_dict = self._get_simple_interface_data_env()
job_interface_dict['command_arguments'] = '${input_files}'
job_interface_dict['input_data'] = [{
'name': 'input_files',
'type': 'files',
'required': True,
}]
job_interface = JobInterface(job_interface_dict)
job_data = JobData(job_data_dict)
job_environment = job_environment_dict
job_exe_id = 1
job_interface.perform_pre_steps(job_data, job_environment)
self.assertRaises(InvalidData, lambda: job_interface.fully_populate_command_argument(job_data,
job_environment,
job_exe_id))
def test_file_in_command(self, mock_retrieve_call, mock_os_mkdir,
mock_get_one_file, mock_setup_upload):
job_exe_id = 1
job_input_dir = file_system.get_job_exe_input_data_dir(job_exe_id)
def new_retrieve(arg1, arg2, arg3):
return {
'file1_out': [input_file_path],
}
input_file_path = os.path.join(job_input_dir, 'file1', 'foo.txt')
mock_retrieve_call.side_effect = new_retrieve
mock_get_one_file.side_effect = lambda (arg1): input_file_path
job_interface_dict, job_data_dict, job_environment_dict = self._get_simple_interface_data_env(
)
job_interface_dict['command_arguments'] = '${file1}'
job_interface_dict['input_data'] = [{
'name': 'file1',
'type': 'file',
'required': True,
}]
job_data_dict['input_data'].append({
'name': 'file1',
'file_id': self.file.id,
})
job_data_dict['output_data'].append({
'name': 'file1_out',
'workspace_id': self.workspace.id,
})
job_interface = JobInterface(job_interface_dict)
job_data = JobData(job_data_dict)
job_environment = JobEnvironment(job_environment_dict)
job_interface.perform_pre_steps(job_data, job_environment, job_exe_id)
job_command_arguments = job_interface.fully_populate_command_argument(
job_data, job_environment, job_exe_id)
self.assertEqual(job_command_arguments, input_file_path,
'expected a different command from pre_steps')
mock_setup_upload.assert_called_once_with(
file_system.get_job_exe_output_data_dir(job_exe_id),
file_system.get_job_exe_output_work_dir(job_exe_id),
self.workspace)
def test_complex_command(self):
job_interface_dict, job_data_dict, job_environment_dict = self._get_simple_interface_data_env()
job_interface_dict['command_arguments'] = '${-f :prop1}'
job_interface_dict['input_data'] = [{
'name': 'prop1',
'type': 'property',
'required': True,
}]
job_data_dict['input_data'].append({
'name': 'prop1',
'value': 'property-value',
})
job_interface = JobInterface(job_interface_dict)
job_data = JobData(job_data_dict)
job_environment = job_environment_dict
job_exe_id = 1
job_interface.perform_pre_steps(job_data, job_environment)
job_command_arguments = job_interface.fully_populate_command_argument(job_data, job_environment, job_exe_id)
self.assertEqual(job_command_arguments, '-f property-value', 'expected a different command from pre_steps')
def test_property_in_command(self):
job_interface_dict, job_data_dict, job_environment_dict = self._get_simple_interface_data_env()
job_interface_dict['command_arguments'] = '${prop1}'
job_interface_dict['input_data'] = [{
'name': 'prop1',
'type': 'property',
'required': True,
}]
job_data_dict['input_data'].append({
'name': 'prop1',
'value': 'property-value',
})
job_interface = JobInterface(job_interface_dict)
job_data = JobData(job_data_dict)
job_environment = JobEnvironment(job_environment_dict)
job_exe_id = 1
job_interface.perform_pre_steps(job_data, job_environment, 1)
job_command_arguments = job_interface.fully_populate_command_argument(job_data, job_environment, job_exe_id)
self.assertEqual(job_command_arguments, 'property-value', 'expected a different command from pre_steps')
