def print_initial():
print 'Starting...'
for sys in 'WCH':
for file_name in os.listdir('../LogFiles/Sim1/' + sys):
with open('../LogFiles/Sim1/' + sys + '/' + file_name, 'r') as f:
data = jlb(f)
for s in 'WCH':
print data['scores'][s][0][0], '\t', data['scores'][s][0][1]
def print_initial():
print 'Starting...'
for systems in ('WCH', 'WC','WH','CH'):
for file_name in os.listdir('../LogFiles/Sim2/' + systems):
with open('../LogFiles/Sim2/' + systems + '/' + file_name, 'r') as f:
data = jlb(f)
for sys in 'WCH':
print systems, '\t', sys, '\t', data['scores'][sys][0][0], '\t', data['scores'][sys][0][1]
def print_initial():
print 'Starting...'
for systems in ('WC', 'WH', 'CW', 'CH', 'HW', 'HC'):
for file_name in os.listdir('../LogFiles/Sim3a/' + systems):
with open('../LogFiles/Sim3a/' + systems + '/' + file_name,
'r') as f:
data = jlb(f)
for sys in 'WCH':
print systems, '\t', sys, '\t', data['scores'][sys][0][
0], '\t', data['scores'][sys][0][1]
def print_scores():
print 'Starting...'
print 'Group\tiPAccW\tiAAccW\tfPAccW\tfAAccW\tiPAccC\tiAAccC\tfPAccC\tfAAccC\tiPAccH\tiAAccH\tfPAccH\tfAAccH\t'
for systems in ('WCH', 'WC','WH','CH'):
for file_name in os.listdir('../LogFiles/Sim2/' + systems):
with open('../LogFiles/Sim2/' + systems + '/' + file_name, 'r') as f:
data = jlb(f)
string = systems + '\t'
for s in 'WCH':
string = string + str(data['scores'][s][0][0]) + '\t' + str(data['scores'][s][0][1]) + '\t' + str(data['scores'][s][-1][0]) + '\t' + str(data['scores'][s][-1][1]) + '\t'
print string
def print_scores():
print 'Starting...'
print 'Group\tiPAccW\tiAAccW\tfPAccW\tfAAccW\tiPAccC\tiAAccC\tfPAccC\tfAAccC\tiPAccH\tiAAccH\tfPAccH\tfAAccH\t'
for sys in 'WCH':
for file_name in os.listdir('../LogFiles/Sim1/' + sys):
with open('../LogFiles/Sim1/' + sys + '/' + file_name, 'r') as f:
data = jlb(f)
string = sys + '\t'
for s in 'WCH':
string = string + str(data['scores'][s][0][0]) + '\t' + str(data['scores'][s][0][1]) + '\t' + str(data['scores'][s][-1][0]) + '\t' + str(data['scores'][s][-1][1]) + '\t'
print string
def score_all():
for sys in 'WCH':
for file_name in os.listdir('../LogFiles/Sim1/' + sys):
with open('../LogFiles/Sim1/' + sys + '/' + file_name, 'r+') as f:
data = jlb(f)
states = data['states']
som = SOM(30, 30, 12, .25, sys, 'M')
for state in states:
state = np.array(state)
som.set_nodes(state)
som.score()
scores = som.log['scores']
data = {'states':states, 'scores':scores}
f.seek(0)
json.dump(data, f)
f.truncate()
def avg_scores_sim1():
print 'Starting...'
score_log = {}
for sys in 'WCH':
total_scores = np.array([[0., 0., 0.] for i in range(101)])
for file_name in os.listdir('../LogFiles/Sim1/' + sys):
with open('../LogFiles/Sim1/' + sys + '/' + file_name, 'r') as f:
data = jlb(f)
print sys, file_name, data['scores'][sys][-1]
scores = np.array(data['scores'][sys])
total_scores += scores
avg_scores = total_scores/10.
score_log[sys] = (avg_scores).tolist()
f = open('../LogFiles/Sim1/Extracted/Scores.json', 'w')
json.dump(score_log, f)
def avg_scores_sim3():
print 'Starting...'
score_log = {}
for systems in ('WC', 'WH','CW','CH','HW','HC'):
score_log[systems] = {}
for sys in systems:
total_scores = np.array([[0., 0., 0.] for i in range(101)])
for file_name in os.listdir('../LogFiles/Sim3b/' + systems):
with open('../LogFiles/Sim3b/' + systems + '/' + file_name, 'r') as f:
data = jlb(f)
scores = np.array(data['scores'][sys])
total_scores += scores
avg_scores = total_scores/10.
score_log[systems][sys] = (avg_scores).tolist()
f = open('../LogFiles/Sim3b/Extracted/Scores.json', 'w')
json.dump(score_log, f)
def avg_scores_sim3():
print 'Starting...'
score_log = {}
for systems in ('WC', 'WH', 'CW', 'CH', 'HW', 'HC'):
score_log[systems] = {}
for sys in systems:
total_scores = np.array([[0., 0., 0.] for i in range(101)])
for file_name in os.listdir('../LogFiles/Sim3b/' + systems):
with open('../LogFiles/Sim3b/' + systems + '/' + file_name,
'r') as f:
data = jlb(f)
scores = np.array(data['scores'][sys])
total_scores += scores
avg_scores = total_scores / 10.
score_log[systems][sys] = (avg_scores).tolist()
f = open('../LogFiles/Sim3b/Extracted/Scores.json', 'w')
json.dump(score_log, f)
def sim3(mode1, mode2, sys1, sys2):
for i in range(10):
f = open('../LogFiles/Sim1/' + sys1 + '/log' + str(i) + '.json', 'r')
json = jlb(f)
nodes = scipy.array(json['states'][-1])
som = SOM(30, 30, 12, .25, sys2, mode2, nodes)
# Fix radius and learning rates
som.learning_rate /= 100.
som.radius = 1.
som.fixedR = True
som.fixedLR = True
# Update dataset to include new system(s)
keynames, keys, data = prep_data(mode2, sys2)
som.train(100, data,
'../LogFiles/Sim3a/' + sys2 + '/log' + str(i) + '.json')
output_results(som, keynames, keys)
def std_devs_sim1():
print 'Starting...'
dev_log = {}
for sys in 'WCH':
scores = np.empty((101,3,10))
i = 0
for file_name in os.listdir('../LogFiles/Sim1/' + sys):
with open('../LogFiles/Sim1/' + sys + '/' + file_name, 'r') as f:
data = jlb(f)
scores[:,:,i] = np.array(data['scores'][sys])
i += 1
std_devs = np.empty((101,3))
for x in range(101):
for y in range(3):
std_devs[x,y] = np.std(scores[x,y,:])
dev_log[sys] = (std_devs).tolist()
f = open('../LogFiles/Sim1/Extracted/Std_Devs.json', 'w')
json.dump(dev_log, f)
