def test_get_unassigned_barcodes(self):
with self.assertRaises(ValueError):
db.get_unassigned_barcodes(999999999)
obs = db.get_unassigned_barcodes()
self.assertEqual(obs, [])
barcodes = db.create_barcodes(3)
obs = db.get_unassigned_barcodes()
self.assertEqual(obs, barcodes)
obs = db.get_unassigned_barcodes(1)
self.assertEqual(obs, [barcodes[0]])
def test_get_unassigned_barcodes(self):
with self.assertRaises(ValueError):
db.get_unassigned_barcodes(999999999)
obs = db.get_unassigned_barcodes()
self.assertEqual(obs, [])
barcodes = db.create_barcodes(3)
obs = db.get_unassigned_barcodes()
self.assertEqual(obs, barcodes)
obs = db.get_unassigned_barcodes(1)
self.assertEqual(obs, [barcodes[0]])
def post(self):
tag = self.get_argument("tag")
if not tag:
tag = None
projects = self.get_arguments("projects")
num_swabs = map(int, self.get_arguments("swabs"))
num_kits = map(int, self.get_arguments("kits"))
kits = []
fields = ""
try:
kits = db.create_ag_kits(zip(num_swabs, num_kits), tag, projects)
fields = ','.join(kits[0]._fields)
except Exception as e:
msg = "ERROR: %s" % str(e)
else:
msg = "Kits created! Please wait for downloads."
project_names = db.getProjectNames()
remaining = len(db.get_unassigned_barcodes())
self.render("ag_new_kit.html",
projects=project_names,
currentuser=self.current_user,
msg=msg,
kitinfo=dumps(kits),
remaining=remaining,
fields=fields)
def get(self):
project_names = db.getProjectNames()
remaining = len(db.get_unassigned_barcodes())
self.render("ag_new_kit.html", projects=project_names,
currentuser=self.current_user, msg="", kitinfo=[],
fields="", remaining=remaining)
def get(self):
project_names = db.getProjectNames()
remaining = len(db.get_unassigned_barcodes())
self.render("ag_new_kit.html", projects=project_names,
currentuser=self.current_user, msg="", kitinfo=[],
fields="", remaining=remaining)
def test_get(self):
self.mock_login_admin()
response = self.get('/ag_new_kit/')
self.assertEqual(response.code, 200)
for project in db.getProjectNames():
self.assertIn("<option value='%s'>%s</option>" %
(project, project), response.body)
self.assertIn("%i</span> unassigned barcodes" %
len(db.get_unassigned_barcodes()), response.body)
def test_get(self):
self.mock_login_admin()
response = self.get('/ag_new_kit/')
self.assertEqual(response.code, 200)
obs = response.body.decode('utf-8')
for project in db.getProjectNames():
self.assertIn("<option value='%s'>%s</option>" %
((xhtml_escape(project),) * 2), obs)
self.assertIn("%i</span> unassigned barcodes" %
len(db.get_unassigned_barcodes()), obs)
def test_get(self):
self.mock_login_admin()
response = self.get('/ag_new_kit/')
self.assertEqual(response.code, 200)
obs = response.body.decode('utf-8')
for project in db.getProjectNames():
self.assertIn(
"<option value='%s'>%s</option>" %
((xhtml_escape(project), ) * 2), obs)
self.assertIn(
"%i</span> unassigned barcodes" %
len(db.get_unassigned_barcodes()), obs)
def get(self):
project_names = db.getProjectNames()
remaining = len(db.get_unassigned_barcodes())
self.render("ag_new_barcode.html",
currentuser=self.current_user,
projects=project_names,
barcodes=[],
remaining=remaining,
msg="",
newbc=[],
assignedbc=[],
assign_projects="")
def post(self):
# create barcodes
msg = ""
newbc = []
assignedbc = []
projects = []
action = self.get_argument("action")
num_barcodes = int(self.get_argument('numbarcodes'))
if action == "create":
newbc = db.create_barcodes(num_barcodes)
msg = ("%d Barcodes created! Please wait for barcode download" %
num_barcodes)
elif action == "assign":
projects = [
url_unescape(p).encode('utf-8')
for p in self.get_arguments('projects')
]
new_project = self.get_argument('newproject').strip()
try:
if new_project:
db.create_project(new_project)
projects.append(new_project)
assignedbc = db.assign_barcodes(num_barcodes, projects)
except ValueError as e:
msg = u"ERROR! %s" % e.message
else:
projects = [p.decode('utf-8') for p in projects]
tmp = u"%d barcodes assigned to %s, please wait for download."
msg = tmp % (num_barcodes, ", ".join(projects))
else:
raise HTTPError(400, 'Unknown action: %s' % action)
project_names = db.getProjectNames()
remaining = len(db.get_unassigned_barcodes())
self.render("ag_new_barcode.html",
currentuser=self.current_user,
projects=project_names,
remaining=remaining,
msg=msg,
newbc=newbc,
assignedbc=assignedbc,
assign_projects=", ".join(projects))
def post(self):
# create barcodes
msg = ""
newbc = []
assignedbc = []
projects = []
action = self.get_argument("action")
num_barcodes = int(self.get_argument('numbarcodes'))
if action == "create":
newbc = db.create_barcodes(num_barcodes)
msg = ("%d Barcodes created! Please wait for barcode download"
% num_barcodes)
elif action == "assign":
projects = [url_unescape(p).encode('utf-8')
for p in self.get_arguments('projects')]
new_project = self.get_argument('newproject').strip()
try:
if new_project:
db.create_project(new_project)
projects.append(new_project)
assignedbc = db.assign_barcodes(num_barcodes, projects)
except ValueError as e:
msg = u"ERROR! %s" % e.message
else:
projects = [p.decode('utf-8') for p in projects]
tmp = u"%d barcodes assigned to %s, please wait for download."
msg = tmp % (num_barcodes, ", ".join(projects))
else:
raise HTTPError(400, 'Unknown action: %s' % action)
project_names = db.getProjectNames()
remaining = len(db.get_unassigned_barcodes())
self.render("ag_new_barcode.html", currentuser=self.current_user,
projects=project_names, remaining=remaining,
msg=msg, newbc=newbc, assignedbc=assignedbc,
assign_projects=", ".join(projects))
def post(self):
tag = self.get_argument("tag")
if not tag:
tag = None
projects = self.get_arguments("projects")
num_swabs = map(int, self.get_arguments("swabs"))
num_kits = map(int, self.get_arguments("kits"))
kits = []
fields = ""
try:
kits = db.create_ag_kits(zip(num_swabs, num_kits), tag, projects)
fields = ','.join(kits[0]._fields)
except Exception as e:
msg = "ERROR: %s" % str(e)
else:
msg = "Kits created! Please wait for downloads."
project_names = db.getProjectNames()
remaining = len(db.get_unassigned_barcodes())
self.render("ag_new_kit.html", projects=project_names,
currentuser=self.current_user, msg=msg,
kitinfo=dumps(kits), remaining=remaining,
fields=fields)
def get(self):
project_names = db.getProjectNames()
remaining = len(db.get_unassigned_barcodes())
self.render("ag_new_barcode.html", currentuser=self.current_user,
projects=project_names, barcodes=[], remaining=remaining,
msg="", newbc=[], assignedbc=[], assign_projects="")