Exemple #1
0
 def compute_all_AD(self):
     """
     Attachment/detachment analysis.
     """
     if len(self.state_list) <= 1: return
     if not 'sden' in self.state_list[0]: return
     
     jmol_orbs = self.ioptions.get('jmol_orbitals')
     if jmol_orbs:
         jmolNDO = lib_mo.jmol_MOs("ndo")
         jmolNDO.pre(ofile=self.ioptions['mo_file'])
     
     for state in self.state_list[1:]:
         print("A/D analysis for %s"%state['name'])
         (ad, W) = self.ret_NDO(state, self.state_list[0])
         
         if jmol_orbs:
             self.export_NDOs_jmol(state, jmolNDO, ad, W)
         
         if self.ioptions['molden_orbitals']:
             self.export_NDOs_molden(state, ad, W)
         
         if self.ioptions.get('pop_ana'):    
             self.set_AD(state, ad, W)
         
     if jmol_orbs:
         jmolNDO.post()
Exemple #2
0
    def compute_all_AD(self):
        """
        Attachment/detachment analysis.
        """
        if len(self.state_list) <= 1: return
        if not 'sden' in self.state_list[0]: return

        jmol_orbs = self.ioptions.get('jmol_orbitals')
        if jmol_orbs:
            jmolNDO = lib_mo.jmol_MOs("ndo")
            jmolNDO.pre(ofile=self.ioptions['mo_file'])

        for state in self.state_list[1:]:
            print("A/D analysis for %s" % state['name'])
            (ad, W) = self.ret_NDO(state, self.state_list[0])

            if jmol_orbs:
                self.export_NDOs_jmol(state, jmolNDO, ad, W)

            if self.ioptions['molden_orbitals']:
                self.export_NDOs_molden(state, ad, W)

            if self.ioptions.get('pop_ana'):
                self.set_AD(state, ad, W)

        if jmol_orbs:
            jmolNDO.post()
Exemple #3
0
 def compute_all_NTO(self):
     if len(self.state_list) == 0: return
     if not 'tden' in self.state_list[0]: return
     
     jmol_orbs = self.ioptions.get('jmol_orbitals')
     if jmol_orbs:
         jmolNTO = lib_mo.jmol_MOs("nto")
         jmolNTO.pre(ofile=self.ioptions.get('mo_file', strict=False))
     
     for state in self.state_list:
         (U, lam, Vt) = self.ret_NTO(state)
         if jmol_orbs:
             self.export_NTOs_jmol(state, jmolNTO, U, lam, Vt)
             
         if self.ioptions['molden_orbitals']:
             self.export_NTOs_molden(state, U, lam, Vt)
         
     if jmol_orbs:
         jmolNTO.post()
Exemple #4
0
    def compute_all_NTO(self):
        if len(self.state_list) == 0: return
        if not 'tden' in self.state_list[0]: return

        jmol_orbs = self.ioptions.get('jmol_orbitals')
        if jmol_orbs:
            jmolNTO = lib_mo.jmol_MOs("nto")
            jmolNTO.pre(ofile=self.ioptions.get('mo_file', strict=False))

        for state in self.state_list:
            (U, lam, Vt) = self.ret_NTO(state)
            if jmol_orbs:
                self.export_NTOs_jmol(state, jmolNTO, U, lam, Vt)

            if self.ioptions['molden_orbitals']:
                self.export_NTOs_molden(state, U, lam, Vt)

        if jmol_orbs:
            jmolNTO.post()