def read(self, filename): libsbol.readDocument(self.ptr, filename) # Instantiate python proxy objects for each C object in file for i in range(0, libsbol.getNumDNASequences(self.ptr)): ptr = libsbol.getNthDNASequence(self.ptr, i) uri = libsbol.getDNASequenceURI(ptr) seq = DNASequence(self, uri, ptr) for i in range(0, libsbol.getNumSequenceAnnotations(self.ptr)): ptr = libsbol.getNthSequenceAnnotation(self.ptr, i) uri = libsbol.getSequenceAnnotationURI(ptr) seq_annotation = SequenceAnnotation(self, uri, ptr) for i in range(0, libsbol.getNumDNAComponents(self.ptr)): ptr = libsbol.getNthDNAComponent(self.ptr, i) uri = libsbol.getDNAComponentURI(ptr) component = DNAComponent(self, uri, ptr) for i in range(0, libsbol.getNumCollections(self.ptr)): ptr = libsbol.getNthCollection(self.ptr, i) uri = libsbol.getCollectionURI(ptr) collection = SequenceAnnotation(self, uri, ptr)
def uri(self): return libsbol.getCollectionURI(self.ptr)