def show_citations(self):
# build list of program-specific citations
program_citations = list()
if (self.program_class.citations is not None):
class_citations = citations.master_citation_phil.fetch(
source=self.program_class.citations).extract()
for citation in class_citations.citation:
program_citations.append(citation)
for article_id in self.program_class.known_article_ids:
citation = citations.citations_db.get(article_id)
if (citation is not None):
program_citations.append(citation)
else:
raise Sorry('"%s" not found citations database' % article_id)
# show program-specific citations and general citation for CCTBX
if (len(program_citations) > 0):
print('Citation(s) for %s:' % self.prog, file=self.logger)
print('-' * self.text_width, file=self.logger)
print('', file=self.logger)
for citation in program_citations:
citations.show_citation(citation,
out=self.logger,
format=self.namespace.citations)
self.show_cctbx_citation()
def show_cctbx_citation(self):
print('\nGeneral citation for CCTBX:', file=self.logger)
print('-' * self.text_width, file=self.logger)
print('', file=self.logger)
citations.show_citation(citations.citations_db['cctbx'],
out=self.logger,
format=self.namespace.citations)
def show_template_citation(text_width=80, logger=None,
citation_format='default'):
assert(logger is not None)
print('\nGeneral citation for CCTBX:', file=logger)
print('-'*text_width, file=logger)
print('', file=logger)
citations.show_citation(citations.citations_db['cctbx'], out=logger,
format=citation_format)
