Python SequenceParameters.get_Omega Exemples

Exemple #1

def get_features_charge(seq):
    """Return dictionary of all features associated with charge."""
    SeqOb = SequenceParameters(seq)
    return {'FCR': FCR(seq), 'NCPR': NCPR(seq),
            'net_charge': net_charge(seq), 'net_charge_P': net_charge_P(seq),
            'RK_ratio': RK_ratio(seq), 'ED_ratio': ED_ratio(seq),
            'kappa': SeqOb.get_kappa(), 'omega': SeqOb.get_Omega(), 'SCD': SeqOb.get_SCD()}

Exemple #2

def feat_charge(seq):
    SeqOb = SequenceParameters(seq)
    return {
        'FCR': FCR(seq),
        'NCPR': NCPR(seq),
        'net_charge': net_charge(seq),
        'net_charge_P': net_charge_P(seq),
        'RK_ratio': RK_ratio(seq),
        'ED_ratio': ED_ratio(seq),
        'kappa': SeqOb.get_kappa(),
        'omega': SeqOb.get_Omega(),
        'SCD': SeqOb.get_SCD()
    }