def featureList(treeIDsleft, treeIDsright, biniter):
feature = {}
fpair = []
result = []
for id1,id2 in zip(treeIDsleft, treeIDsright):
fpair = featureVector(id1, id2, biniter)
feature[str(id1) + "--" + str(id2)] = fpair
#for ID in range(0, len(treeIDsleft)):
# fpair = featureVector(treeIDsleft[i], treeIDsright[i])
# feature.append(fpair)
return feature
from math import sqrt
from ini.trakem2.display import Display
from jarray import array
import sys
sys.path.append("/Users/berthola/Desktop/Fiji Scripts")
from matrixoperator import Matrix
from javax.media.j3d import Transform3D
from javax.vecmath import Point3d
from ij.io import FileSaver
from profilingFixedCoordinates import getDendriticProfiles
from profilingFixedCoordinates import getNodeCoordinates
from machine_ import featureVector
good = featureVector(72481, 99481, 50)
bad = featureVector(83160, 99481, 50)
plot = Plot("histogram", "y-coordinates", "count",range(0, 50), good)
plot.setLimits(0.0, 50.0, 0, 60000000.0)
plot.show()
fs=FileSaver(plot.getImagePlus())
fs.saveAsPng(System.getProperty("user.home") + "/Desktop/Histotest/y" + "good.png")
plot = Plot("histogram", "y-coordinates", "count",range(0, 50), bad)
plot.setLimits(0.0, 50.0, 0, 60000000.0)
plot.show()
