def _test_read_range_cser(self):
"test reading case series over specified ranges"
src = data['cser']['float32']
s1 = 3
s2 = 1
e1 = 8
e2 = 4
caseList = [(s1, e1),
(s1, e2),
(s2, e1),
(s2, e2)]
for s, e in caseList:
size = (e - s + 1)
res = ma.array([0]*size , np.float32, mask=[1]*size )
if e < src.size: _e = size
else: _e = size - max(e-size, 0, size - src.size)
res[0:_e] = src[s-1:min(e, src.size)]
ser = self.db.read('$cser_float32', start_case=s, end_case=e)
assert_array_equal(res, ser)
def read(self, name,
start_date=None, end_date=None,
start_case=None, end_case=None, max_string_len=65):
"""read specified object(s) from database
:Parameters:
- `name` (string or list of strings) : names of objects that will be
read from the database
- `start_date` (int, *[None]*) : Applies only when reading time series.
If specified, only data points on or after `start_date` will be read.
If None, data will be read from the first value of the series.
- `end_date` (int, *[None]*) : Applies only when reading time series.
If specified, only data points on or before `end_date` will be read.
If None, data will be read to the last value of the series.
- `start_case` (int, *[None]*) : Applies only when reading case series.
If specified, only data points on or after `start_case` will be read.
If None, data will be read starting from case index 1
- `end_case` (int, *[None]*) : Applies only when reading case series.
If specified, only data points on or before `end_case` will be read.
If None, data will be read to the last value of the series.
- `max_string_len` (int, *[65]*) : Applies only when readings strings
or series of strings. This is the maximum length of string that can
be read. Lower values result in less memory usage, so you should
specify this as low as is reasonable for your data.
:Return:
if `name` is a list of strings:
case insensitive dictionary of the objects
if `name` is a single string:
object from database that is stored as `name`"""
isSingle = False
if isinstance(name, str):
names = [name]
isSingle = True
else:
names = name
items = CaseInsensitiveDict()
#default to -1. This will get the entire range
_start_case = _end_case = -1
_start_date = _end_date = -1
range_freq = None
if start_date is not None:
_start_date = start_date.value - date_value_adjust[start_date.freq]
range_freq = freq_revmap[start_date.freq]
if end_date is not None:
if start_date is not None and start_date.freq != end_date.freq:
raise ValueError("start_date and end_date must be same frequency")
_end_date = end_date.value - date_value_adjust[end_date.freq]
if range_freq is None:
range_freq = freq_revmap[end_date.freq]
if start_case is not None: _start_case = start_case
if end_case is not None: _end_case = end_case
if len(set([_start_case, _end_case, _start_date, _end_date, -1])) != 1:
checkFreq = True
else:
checkFreq = False
for objName in names:
objName = objName.upper()
if checkFreq:
objFreq = self.obj_size(objName)['freq']
if objFreq == range_freq:
start_index, end_index = _start_date, _end_date
elif objFreq == HCASEX:
start_index, end_index = _start_case, _end_case
else:
start_index, end_index = -1, -1
else:
start_index, end_index = -1, -1
result = cf_read(self.dbkey, objName, start_index,
end_index, max_string_len)
if result['type'] == HBOOLN:
numpyType = numpy.bool_
else:
numpyType = fametype_tonumpy(result['type'])
if result['type'] == HNAMEL:
pyObj = [x for x in result['data'][1:-1].split(", ") \
if x != '']
elif result['class'] == HSCALA:
if isinstance(result['data'], str):
if result['mask']:
pyObj = None
else:
pyObj = result['data']
else:
if result['mask'][0]:
pyObj = None
else:
pyObj = result['data'][0]
if result['type'] >= 8: # date type
value = pyObj+ \
date_value_adjust[freq_map[result['type']]]
pyObj = ts.Date(
freq=freq_map[result['type']],
value=value)
else:
pyObj = numpyType(pyObj)
elif result['class'] == HSERIE:
if 'data' in result:
vals = result['data']
mask = result['mask']
if not mask.any(): mask = ma.nomask
else:
vals = []
mask = ma.nomask
if result['type'] >= 8: # date type
valadj = date_value_adjust[freq_map[result['type']]]
if len(vals) > 0: vals += valadj
data = ts.DateArray(vals,
freq=freq_map[result['type']])
else:
data = numpy.array(vals, dtype=numpyType)
if result['freq'] == HCASEX:
pyObj = ma.array(data, mask=mask)
else:
observed = observed_map[result['observed']]
freq = freq_map[result['freq']]
if 'data' in result:
start_date = ts.Date(
freq=freq,
value=result['startindex']+date_value_adjust[freq])
else:
start_date = None
pyObj = ts.time_series(data, freq=freq,
start_date=start_date,
observed=observed, mask=mask)
items[objName] = pyObj
if isSingle:
return items.values()[0]
return items
def _test_write_empty_cser(self):
"test writing a case series with no data"
self.db.write_cser('$emptyCSer', ma.array([]))
#
newdates = __getdates(dates=dates, newdates=newdates, length=nvars, freq=None, start_date=None)
return MultiTimeSeries(_datalist, dates=newdates, dtype=mdescr)
################################################################################
if __name__ == "__main__":
import numpy as N
from maskedarray.testutils import assert_equal
if 1:
d = N.arange(5)
m = MA.make_mask([1, 0, 0, 1, 1])
base_d = N.r_[d, d[::-1]].reshape(2, -1).T
base_m = N.r_[[m, m[::-1]]].T
base = MA.array(base_d, mask=base_m)
mrec = MR.fromarrays(base.T)
dlist = ["2007-%02i" % (i + 1) for i in d]
dates = date_array(dlist)
ts = time_series(mrec, dates)
mts = MultiTimeSeries(mrec, dates)
self_data = [d, m, mrec, dlist, dates, ts, mts]
assert isinstance(mts.f0, TimeSeries)
if 0:
mts[:2] = 5
assert_equal(mts.f0._data, [5, 5, 2, 3, 4])
assert_equal(mts.f1._data, [5, 5, 2, 1, 0])
assert_equal(mts.f0._mask, [0, 0, 0, 1, 1])
assert_equal(mts.f1._mask, [0, 0, 0, 0, 1])