Exemple #1
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def find_best_weights(train, test, clf, thresh=0.5):
    y_pred_cm = run_cm(train, test, '../data/ADR-lexicon.txt')
    _, y_prob_tfidf = run_tfidf(train, test, grams='123', n_dim=40000, clf=clf)
    _, y_prob_nblcr = run_nblcr(train, test, '../data/nblcr', grams='123', clf=clf)
    _, y_prob_we = run_we(train, test, '../data/w2v_150.txt', 150, clf=clf)
    
    alphas = np.float32(np.linspace(0, 1, 21))
    max_f1 = 0
    best_weights = [0, 0, 0]
    
    for alpha1 in alphas:
        for alpha2 in alphas:
            for alpha3 in alphas:
                if alpha1 + alpha2 + alpha3 > 1: continue
                              
                y_pred = []
                for i in xrange(len(y_pred_cm)):
                    val = alpha1*y_pred_cm[i] + alpha2*y_prob_tfidf[i,1] + alpha3*y_prob_nblcr[i,1] + (1-alpha1-alpha2-alpha3)*y_prob_we[i,1]
                    if val >= thresh: y_pred.append(1)
                    else: y_pred.append(0)
                f1 = f1_score(test['label'], y_pred)
                if f1 > max_f1:
                    best_weights = [alpha1, alpha2, alpha3]
                    max_f1 = f1
                    
    return best_weights, max_f1
Exemple #2
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def find_best_weights(train, test, clf, thresh=0.5):
    y_pred_cm = run_cm(train, test, '../data/ADR-lexicon.txt')
    _, y_prob_tfidf = run_tfidf(train, test, grams='123', n_dim=40000, clf=clf)
    _, y_prob_nblcr = run_nblcr(train,
                                test,
                                '../data/nblcr',
                                grams='123',
                                clf=clf)
    _, y_prob_we = run_we(train, test, '../data/w2v_150.txt', 150, clf=clf)

    alphas = np.float32(np.linspace(0, 1, 21))
    max_f1 = 0
    best_weights = [0, 0, 0]

    for alpha1 in alphas:
        for alpha2 in alphas:
            for alpha3 in alphas:
                if alpha1 + alpha2 + alpha3 > 1: continue

                y_pred = []
                for i in xrange(len(y_pred_cm)):
                    val = alpha1 * y_pred_cm[i] + alpha2 * y_prob_tfidf[
                        i, 1] + alpha3 * y_prob_nblcr[i, 1] + (
                            1 - alpha1 - alpha2 - alpha3) * y_prob_we[i, 1]
                    if val >= thresh: y_pred.append(1)
                    else: y_pred.append(0)
                f1 = f1_score(test['label'], y_pred)
                if f1 > max_f1:
                    best_weights = [alpha1, alpha2, alpha3]
                    max_f1 = f1

    return best_weights, max_f1
Exemple #3
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def run_ensemble(train, test, weights, clf, thresh=0.5):
    y_pred_cm = run_cm(train, test, '../data/ADR-lexicon.txt')
    _, y_prob_tfidf = run_tfidf(train, test, grams='123', n_dim=40000, clf=clf)
    _, y_prob_nblcr = run_nblcr(train, test, '../data/nblcr', grams='123', clf=clf)
    _, y_prob_we = run_we(train, test, '../data/w2v_150.txt', 150, clf=clf)
    
    y_pred = []
    
    for i in xrange(len(y_pred_cm)):
        val = weights[0]*y_pred_cm[i] + weights[1]*y_prob_tfidf[i,1] + weights[2]*y_prob_nblcr[i,1] + (1-weights[0]-weights[1]-weights[2])*y_prob_we[i,1]
        if val >= thresh: y_pred.append(1)
        else: y_pred.append(0)
        
    return y_pred
Exemple #4
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def run_ensemble(train, test, weights, clf, thresh=0.5):
    y_pred_cm = run_cm(train, test, '../data/ADR-lexicon.txt')
    _, y_prob_tfidf = run_tfidf(train, test, grams='123', n_dim=40000, clf=clf)
    _, y_prob_nblcr = run_nblcr(train,
                                test,
                                '../data/nblcr',
                                grams='123',
                                clf=clf)
    _, y_prob_we = run_we(train, test, '../data/w2v_150.txt', 150, clf=clf)

    y_pred = []

    for i in xrange(len(y_pred_cm)):
        val = weights[0] * y_pred_cm[i] + weights[1] * y_prob_tfidf[
            i, 1] + weights[2] * y_prob_nblcr[i, 1] + (
                1 - weights[0] - weights[1] - weights[2]) * y_prob_we[i, 1]
        if val >= thresh: y_pred.append(1)
        else: y_pred.append(0)

    return y_pred