def make(args):
io.start('Making user %s a member of role %s' %
(highlight(args.user), highlight(args.role.upper())))
group_name = _find_group(args.role)
url = config().get('api', 'member') % group_name
post(url, {'username': args.user, 'roleName': args.role.upper()})
def make(args):
io.start('Making user %s a member of role %s' %
(highlight(args.user), highlight(args.role.upper())))
group_name = _find_group(args.role)
url = config.api('member').format(group_name)
post(url, {'username': args.user, 'roleName': args.role.upper()})
def add_package(args):
io.start('Adding package %s' % highlight(args.id))
data = {'id': args.id, 'label': args.id}
if args.parent:
data['parent'] = args.parent
post(config().get('api', 'rest1') + 'sys_md_Package', data)
def enable_rls(args):
io.start('Enabling row level security on entity type %s' %
highlight(args.entity))
ensure_resource_exists(args.entity, ResourceType.ENTITY_TYPE)
post(config().get('api', 'rls'),
data={
'id': args.entity,
'rlsEnabled': True
})
def enable_rls(args):
if not io.confirm(
'Are you sure you want to disable row level security on %s?' %
args.entity):
return
io.start('Disabling row level security on entity type %s' %
highlight(args.entity))
ensure_resource_exists(args.entity, ResourceType.ENTITY_TYPE)
post(config.api('rls'), data={'id': args.entity, 'rlsEnabled': False})
def add_token(args):
io.start('Adding token %s for user %s' %
(highlight(args.token), highlight(args.user)))
user = get(config().get('api', 'rest2') +
'sys_sec_User?attrs=id&q=username==%s' % args.user)
if user.json()['total'] == 0:
raise McmdError('Unknown user %s' % args.user)
user_id = user.json()['items'][0]['id']
data = {'User': user_id, 'token': args.token}
post(config().get('api', 'rest1') + 'sys_sec_Token', data)
def add_user(args):
io.start('Adding user %s' % highlight(args.username))
password = args.set_password if args.set_password else args.username
email = args.with_email if args.with_email else args.username + '@molgenis.org'
active = not args.is_inactive
superuser = args.is_superuser
ch_pwd = args.change_password
post(
config().get('api', 'rest1') + 'sys_sec_User', {
'username': args.username,
'password_': password,
'changePassword': ch_pwd,
'Email': email,
'active': active,
'superuser': superuser
})
def enable_theme(args):
"""
enable_theme enables a bootstrap theme
:param args: commandline arguments containing the id of the theme (without .css)
:exception McmdError: when applying the theme fails
:return None
"""
theme = args.theme.replace('.css', '').replace('.min', '')
io.start('Applying theme {}'.format(highlight(theme)))
# Resource can be bootstrap-name.min.css (if molgenis theme), or name.min.css (if uploaded .min.css), or
# name.css (if uploaded as .css).
if one_resource_exists([theme + '.min.css', theme + '.css', 'bootstrap-' + theme + '.min.css'], ResourceType.THEME):
# Molgenis themes start with bootstrap- but this is stripped from the name in the theme manager
try:
post(config.api('set_theme'), theme)
except:
post(config.api('set_theme'), theme.split('bootstrap-')[1])
else:
raise McmdError(
'Applying theme failed. No themes found containing {} in the name'.format(args.theme, 'sys_set_StyleSheet'))
def add_group(args):
io.start('Adding group %s' % highlight(args.name))
post(config().get('api', 'group'), {
'name': args.name.lower(),
'label': args.name
})