def __init__(self, parent, experiment, handler):
QtWidgets.QDialog.__init__(self, parent)
self.ui = Ui_rereferencingDialog()
self.ui.setupUi(self)
self.experiment = experiment
self.parent = parent
self.handler = handler
subject = self.experiment.active_subject
raw = subject.get_raw()
sfreq = raw.info['sfreq']
# fill the combobox
picks = mne.pick_types(raw.info, eeg=True, meg=False, eog=True)
ch_names = [
ch_name for ch_idx, ch_name in enumerate(raw.info['ch_names'])
if ch_idx in picks
]
for ch_name in ch_names:
self.ui.comboBoxChannel.addItem(ch_name)
self.batching_widget = BatchingWidget(
experiment_getter=self._experiment_getter,
parent=self,
container=self.ui.groupBoxBatching,
geometry=self.ui.batchingWidgetPlaceholder.geometry())
self.ui.gridLayoutBatching.addWidget(self.batching_widget, 0, 0, 1, 1)
def __init__(self, parent, experiment, handler):
QtWidgets.QDialog.__init__(self, parent)
self.ui = Ui_montageDialog()
self.ui.setupUi(self)
self.parent = parent
self.experiment = experiment
self.handler = handler
montage_dir = pkg_resources.resource_filename(
'mne', os.path.join('channels', 'data', 'montages'))
for fname in sorted(os.listdir(montage_dir)):
self.ui.comboBoxSelectFromList.addItem(fname)
self.current_montage_fname = None
self.ui.radioButtonMontageFromList.setChecked(True)
# find out if montage already set.
self.batching_widget = BatchingWidget(
experiment_getter=self._experiment_getter,
parent=self,
container=self.ui.groupBoxBatching,
geometry=self.ui.batchingWidgetPlaceholder.geometry())
self.ui.gridLayoutBatching.addWidget(self.batching_widget, 0, 0, 1, 1)
def __init__(self,
experiment,
parent,
default_name,
handler,
batching=True,
title='Simple dialog'):
QtWidgets.QDialog.__init__(self, parent)
self.ui = Ui_SimpleDialog()
self.ui.setupUi(self)
self.parent = parent
self.experiment = experiment
self.handler = handler
self.setWindowTitle('Meggie - ' + title)
if batching:
self.batching_widget = BatchingWidget(
experiment_getter=self._experiment_getter,
parent=self,
container=self.ui.groupBoxBatching,
geometry=self.ui.batchingWidgetPlaceholder.geometry())
self.ui.gridLayoutBatching.addWidget(self.batching_widget, 0, 0, 1,
1)
else:
self.ui.groupBoxBatching.hide()
self.ui.pushButtonBatch.hide()
self.ui.lineEditName.setText(default_name)
def __init__(self, experiment, parent, selected_spectrum, default_name,
handler):
"""
"""
QtWidgets.QDialog.__init__(self, parent)
self.ui = Ui_CreateReportDialog()
self.ui.setupUi(self)
self.parent = parent
self.experiment = experiment
self.handler = handler
self.selected_spectrum = selected_spectrum
# initialize frequency limits from spectrum data
spectrum_item = experiment.active_subject.spectrum[selected_spectrum]
minfreq = spectrum_item.freqs[0]
maxfreq = spectrum_item.freqs[-1]
self.ui.doubleSpinBoxFreqMin.setValue(minfreq)
self.ui.doubleSpinBoxFreqMax.setValue(maxfreq)
# add a general batching widget to dialog
self.batching_widget = BatchingWidget(
experiment_getter=self.experiment_getter,
parent=self,
container=self.ui.groupBoxBatching,
geometry=self.ui.batchingWidgetPlaceholder.geometry())
self.ui.gridLayoutBatching.addWidget(self.batching_widget, 0, 0, 1, 1)
self.ui.lineEditName.setText(default_name)
def __init__(self, parent, experiment):
QtWidgets.QDialog.__init__(self, parent)
self.ui = Ui_DialogFilter()
self.ui.setupUi(self)
self.parent = parent
self.experiment = experiment
self.batching_widget = BatchingWidget(
experiment_getter=self.experiment_getter,
parent=self,
container=self.ui.groupBoxBatching,
geometry=self.ui.batchingWidgetPlaceholder.geometry())
self.ui.gridLayoutBatching.addWidget(self.batching_widget, 0, 0, 1, 1)
def __init__(self, experiment, parent, epoch_names, default_name):
"""
"""
QtWidgets.QDialog.__init__(self, parent)
self.ui = Ui_TFRDialog()
self.ui.setupUi(self)
self.parent = parent
self.epoch_names = epoch_names
self.experiment = experiment
subject = experiment.active_subject
epochs = subject.epochs[epoch_names[0]].content
self.ui.lineEditEpochName.setText(', '.join(epoch_names))
if epochs.info.get('highpass'):
self.ui.doubleSpinBoxMinFreq.setValue(
max(int(np.ceil(epochs.info['highpass'])),
self.ui.doubleSpinBoxMinFreq.value()))
if epochs.info.get('lowpass'):
self.ui.doubleSpinBoxMaxFreq.setValue(
min(int(np.floor(epochs.info['lowpass'])),
self.ui.doubleSpinBoxMaxFreq.value()))
epoch_length = epochs.times[-1] - epochs.times[0]
# try to use as many cycles as possible
# (window ~= 10 * (n_cycles / (2.0 * np.pi * freq))
minfreq = self.ui.doubleSpinBoxMinFreq.value()
n_cycles = epoch_length * 2.0 * np.pi * minfreq / 10.0
n_cycles = max(np.floor(n_cycles), 1)
self.ui.doubleSpinBoxNcycles.setValue(n_cycles)
# select factor such that minfreq / factor = n_cycles,
# and then ceil
factor = np.ceil(minfreq / float(n_cycles))
self.ui.doubleSpinBoxCycleFactor.setValue(factor)
self.batching_widget = BatchingWidget(
experiment_getter=self.experiment_getter,
parent=self,
container=self.ui.groupBoxBatching,
geometry=self.ui.batchingWidgetPlaceholder.geometry())
self.ui.gridLayoutBatching.addWidget(self.batching_widget, 0, 0, 1, 1)
self.ui.lineEditTFRName.setText(default_name)
def __init__(self, experiment, parent, default_name):
"""
"""
QtWidgets.QDialog.__init__(self, parent)
self.ui = Ui_PowerSpectrumDialog()
self.ui.setupUi(self)
self.parent = parent
self.experiment = experiment
self.intervals = []
raw = self.experiment.active_subject.get_raw()
tmax = np.floor(raw.times[raw.n_times - 1]) - 0.1
self.ui.doubleSpinBoxTmin.setValue(0)
self.ui.doubleSpinBoxTmax.setValue(tmax)
self.ui.doubleSpinBoxTmin.setMaximum(tmax)
self.ui.doubleSpinBoxTmax.setMaximum(tmax)
# set nfft initially to ~2 seconds and overlap to ~1 seconds
sfreq = raw.info['sfreq']
window_in_seconds = 2
nfft = int(
np.power(2,
np.ceil(np.log(sfreq * window_in_seconds) / np.log(2))))
overlap = nfft / 2
self.ui.spinBoxNfft.setValue(nfft)
self.ui.spinBoxOverlap.setValue(overlap)
if raw.info.get('highpass'):
if self.ui.spinBoxFmin.value() < raw.info['highpass']:
self.ui.spinBoxFmin.setValue(int(np.ceil(
raw.info['highpass'])))
if raw.info.get('lowpass'):
if self.ui.spinBoxFmax.value() > raw.info['lowpass']:
self.ui.spinBoxFmax.setValue(int(raw.info['lowpass']))
self.batching_widget = BatchingWidget(
experiment_getter=self.experiment_getter,
parent=self,
container=self.ui.groupBoxBatching,
geometry=self.ui.batchingWidgetPlaceholder.geometry())
self.ui.gridLayoutBatching.addWidget(self.batching_widget, 0, 0, 1, 1)
self.ui.lineEditName.setText(default_name)
def __init__(self, experiment, parent, default_name, handler):
QtWidgets.QDialog.__init__(self, parent)
self.ui = Ui_CreateEpochsFromEventsDialog()
self.ui.setupUi(self)
self.parent = parent
self.experiment = experiment
self.handler = handler
self.events = []
self.batching_widget = BatchingWidget(
experiment_getter=self._experiment_getter,
parent=self,
container=self.ui.groupBoxBatching,
geometry=self.ui.batchingWidgetPlaceholder.geometry())
self.ui.gridLayoutBatching.addWidget(self.batching_widget, 0, 0, 1, 1)
self.ui.lineEditCollectionName.setText(default_name)
def __init__(self, experiment, parent, selected_epochs, default_name):
"""
"""
QtWidgets.QDialog.__init__(self, parent)
self.ui = Ui_CreateEvokedDialog()
self.ui.setupUi(self)
self.parent = parent
self.experiment = experiment
self.selected_epochs = selected_epochs
self.batching_widget = BatchingWidget(
experiment_getter=self.experiment_getter,
parent=self,
container=self.ui.groupBoxBatching,
geometry=self.ui.batchingWidgetPlaceholder.geometry())
self.ui.gridLayoutBatching.addWidget(self.batching_widget, 0, 0, 1, 1)
self.ui.lineEditName.setText(default_name)
def __init__(self, parent, experiment, handler):
QtWidgets.QDialog.__init__(self, parent)
self.ui = Ui_resamplingDialog()
self.ui.setupUi(self)
self.experiment = experiment
self.parent = parent
self.handler = handler
subject = self.experiment.active_subject
raw = subject.get_raw()
sfreq = raw.info['sfreq']
self.ui.labelCurrentRateValue.setText(str(sfreq))
self.batching_widget = BatchingWidget(
experiment_getter=self._experiment_getter,
parent=self,
container=self.ui.groupBoxBatching,
geometry=self.ui.batchingWidgetPlaceholder.geometry())
self.ui.gridLayoutBatching.addWidget(self.batching_widget, 0, 0, 1, 1)
def __init__(self, parent, experiment, handler):
QtWidgets.QDialog.__init__(self, parent)
self.ui = Ui_EventsFromAnnotationsDialog()
self.ui.setupUi(self)
self.experiment = experiment
self.parent = parent
self.handler = handler
self.items = []
subject = self.experiment.active_subject
raw = subject.get_raw()
for annotation_name in sorted(list(set(raw.annotations.description))):
self.ui.comboBoxAnnotation.addItem(annotation_name)
self.batching_widget = BatchingWidget(
experiment_getter=self._experiment_getter,
parent=self,
container=self.ui.groupBoxBatching,
geometry=self.ui.batchingWidgetPlaceholder.geometry())
self.ui.gridLayoutBatching.addWidget(self.batching_widget, 0, 0, 1, 1)