class Config(object):
def __init__(self, base_dir, branch_name):
self.__branch_name = RFSString(branch_name)
with open(os.path.join(base_dir, "project_config.json"), "r") as fd:
self.__project_config = json.load(fd)
with open(os.path.join(base_dir, self.__branch_name.fs(),
"mincid.json"), "r") as fd:
self.__branch_config = json.load(fd)
def project_cfg(self, key):
return self.__project_config[key]
def branch_defines(self, key):
return self.__branch_config[0][key]
def branch_jobs(self):
return self.__branch_config[1]
def expand(self, val):
if val[0] != "$":
return val
return self.__branch_config[0][val[1:]]
def __init__(self, base_dir, branch_name):
self.__branch_name = RFSString(branch_name)
with open(os.path.join(base_dir, "project_config.json"), "r") as fd:
self.__project_config = json.load(fd)
with open(os.path.join(base_dir, self.__branch_name.fs(),
"mincid.json"), "r") as fd:
self.__branch_config = json.load(fd)
def __init__(self, master_conf, desc_file):
with open(master_conf, "r") as fd:
self.__master_config = json.load(fd)
with open(desc_file, "r") as fd:
self.__config = json.load(fd)
self.__name = self.__config['name']
self.__rfs = RFSString(self.__name)
self.__tmp_dir = os.path.join(
self.__master_config["worker_dir"],
self.__rfs.fs(),
time.strftime("%Y%m%d-%H%M%S"))
os.makedirs(self.__tmp_dir, exist_ok=True)
self.__working_dir = os.path.join(self.__tmp_dir, ".mincid")
os.makedirs(self.__working_dir, exist_ok=True)
os.chmod(self.__working_dir, 0o777)
shutil.copyfile(desc_file,
os.path.join(self.__working_dir, "project_config.json"))
shutil.copyfile(master_conf,
os.path.join(self.__working_dir, "mincid_master.json"))
self.__logger = MLogger("Project", self.__name, self.__working_dir)
self.__logger.info("Init project [%s]" % self.__name)
class Project(object):
def __init__(self, master_conf, desc_file):
with open(master_conf, "r") as fd:
self.__master_config = json.load(fd)
with open(desc_file, "r") as fd:
self.__config = json.load(fd)
self.__name = self.__config['name']
self.__rfs = RFSString(self.__name)
self.__tmp_dir = os.path.join(
self.__master_config["worker_dir"],
self.__rfs.fs(),
time.strftime("%Y%m%d-%H%M%S"))
os.makedirs(self.__tmp_dir, exist_ok=True)
self.__working_dir = os.path.join(self.__tmp_dir, ".mincid")
os.makedirs(self.__working_dir, exist_ok=True)
os.chmod(self.__working_dir, 0o777)
shutil.copyfile(desc_file,
os.path.join(self.__working_dir, "project_config.json"))
shutil.copyfile(master_conf,
os.path.join(self.__working_dir, "mincid_master.json"))
self.__logger = MLogger("Project", self.__name, self.__working_dir)
self.__logger.info("Init project [%s]" % self.__name)
def cleanup(self):
"""Cleanup: removes old builds"""
bdir = os.path.join(
self.__master_config["worker_dir"],
self.__rfs.fs())
ldirs = os.listdir(bdir)
# Check if there is something to do.
mbuild_cnt = int(self.__config['max_build_cnt'])
if len(ldirs) < mbuild_cnt:
self.__logger.info("Nothing to remove: should store [%d] existent [%d]"
% (mbuild_cnt, len(ldirs)))
return
sldirs = sorted(ldirs)
while len(sldirs) >= mbuild_cnt:
self.__logger.info("Removing old build [%s]" % sldirs[0])
shutil.rmtree(os.path.join(bdir, sldirs[0]))
del sldirs[0]
def process(self):
self.__logger.info("Start project [%s]" % self.__name)
stdouterr_filename = os.path.join(self.__working_dir,
"sbatch_project.stdouterr")
with open(stdouterr_filename, "w") as fd_stdouterr:
p = subprocess.Popen(
["sbatch", "--job-name=%s+BranchesConfig" % self.__name,
"--output=%s" % os.path.join(self.__working_dir,
"slurm_build_project_%j.out"),
"--export=PYTHONPATH",
os.path.join(self.__master_config['mincid_install_dir'],
"build_branches_config.py"), self.__tmp_dir],
stdout=fd_stdouterr, stderr=fd_stdouterr)
p.wait()
self.__logger.info("sbatch process return value [%d]" % p.returncode)
self.__logger.info("Finished project startup [%s]" % self.__name)
def __start_variant(self, sname, image, variant_list):
base = self.__config.expand(image['base'])
self.__logger.info("Start variant [%s] [%s] [%s]"
% (sname, base, variant_list))
stdouterr_filename = os.path.join(self.__branch_dir,
"start_variants.stdouterr")
dep_jobids = []
# Collect jobids of all dependend stages
if 'depends_on' in self.__config.branch_jobs()[sname]:
for dep_stage in self.__config.branch_jobs()[sname]['depends_on']:
dep_jobids.extend(self.__jobids[dep_stage])
self.__logger.info("Dependent jobids [%s]" % dep_jobids)
with open(stdouterr_filename, "w") as fd_stdouterr:
# Create own temp dir
rfsname = RFSString(self.__name)
rfsbase = RFSString(base)
variant_name = "%s+%s+%s+%s+%s" % \
(self.__config.project_cfg('name'),
rfsname.fs(),
sname, rfsbase.fs(), "_".join(variant_list))
variant_tmp_dir = os.path.join(self.__variants_base_dir, variant_name)
os.makedirs(variant_tmp_dir, exist_ok=True)
variant_desc = {
'name': variant_name,
'base': base,
'branch_name': self.__name,
'global_tmp_dir': self.__tmp_dir,
'directory': variant_tmp_dir
}
if len(variant_list)>0:
variant_desc['variant_list'] = variant_list
for pword in ('install', 'run'):
if pword in self.__config.branch_jobs()[sname]:
variant_desc[
pword] = self.__config.branch_jobs()[sname][pword]
if 'prepare' in image:
variant_desc['prepare'] = image['prepare']
if 'build_prepare' in image:
variant_desc['build_prepare'] = image['build_prepare']
variant_cfg_file_name = os.path.join(
variant_tmp_dir, "variant.json")
with open(variant_cfg_file_name, "w") as fd:
json.dump(variant_desc, fd)
subproc_slist = [
"sbatch", "--job-name=%s" % variant_name,
"--output=%s" % os.path.join(self.__working_dir,
"slurm_build_branch_%j.out"),
"--extra-node-info=1:2:1",
"--export=PYTHONPATH"]
if len(dep_jobids)>0:
dep_str = ":".join(str(x) for x in dep_jobids)
self.__logger.info("New batch is dependent on [%s]" %
dep_str)
subproc_slist.append("--dependency=afterok:%s" % dep_str)
subproc_slist.extend(
[os.path.join(self.__master_config['mincid_install_dir'],
"build_variant.py"), variant_cfg_file_name])
p = subprocess.Popen(subproc_slist,
stdout=subprocess.PIPE, stderr=fd_stdouterr)
res = p.stdout.read()
p.wait()
self.__logger.info("sbatch process return value [%d]" % p.returncode)
decoded = res.decode("UTF-8")
jobnr = int(decoded[20:-1])
self.__jobids[sname].append(jobnr)
self.__logger.info("sbatch process id [%d]" % jobnr)
self.__logger.info("Finished variant [%s] [%s] [%s]"
% (sname, base, variant_list))