Exemple #1
0
def checkFunction(row_index_1, field_name_1, def_field_list, metadata_list, records_list, record_id_map_list, repeating_forms_events_list, form_repetition_map_list):
    element_bad = False
    
    # Get values from first project.
    row_1 = records_list[0][row_index_1]
    record_id = row_1[def_field_list[0]]
    menin_enceph = row_1["menin_enceph"]

    # Get values from second project.
    event_2 = "acute_arm_1"
    instance_2 = None


    infectma___1, infectma___1_hidden = getEntryLR(record_id, event_2, instance_2, "infectma___1", records_list[1], record_id_map_list[1], metadata_list[1], form_repetition_map_list[1])
    infectma___3, infectma___3_hidden = getEntryLR(record_id, event_2, instance_2, "infectma___3", records_list[1], record_id_map_list[1], metadata_list[1], form_repetition_map_list[1])

    err1 = (menin_enceph == '1') and ((infectma___1 != '1') and (infectma___3 != '1'))
    err2 = (menin_enceph == '0') and ((infectma___1 != '0') or (infectma___3 != '0'))
#    err3 = ((infectma___1 == '0') and (infectma___3 == '0')) and (menin_enceph != '0') # do not count as error because an unchecked checkbox could be missing data.
    err4 = ((infectma___1 == '1') or (infectma___3 == '1')) and (menin_enceph != '1')

    if err1 or err2 or err4:
        element_bad = True

    return element_bad
Exemple #2
0
def checkFunction(row_index_1, field_name_1, def_field_list, metadata_list,
                  records_list, record_id_map_list,
                  repeating_forms_events_list, form_repetition_map_list):
    element_bad = False

    # Get values from first project.
    row_1 = records_list[0][row_index_1]
    record_id = row_1[def_field_list[0]]
    def___1_1 = row_1["defvsposseizure___1"]
    def___3_1 = row_1["defvsposseizure___3"]
    def___4_1 = row_1["defvsposseizure___4"]
    def___5_1 = row_1["defvsposseizure___5"]

    # Get values from second project
    event_2 = "acute_arm_1"
    instance_2 = None

    seizind_2, hidden = getEntryLR(record_id, event_2, instance_2, "seizind",
                                   records_list[1], record_id_map_list[1],
                                   metadata_list[1],
                                   form_repetition_map_list[1])
    seizinde_2, hidden = getEntryLR(record_id, event_2, instance_2, "seizinde",
                                    records_list[1], record_id_map_list[1],
                                    metadata_list[1],
                                    form_repetition_map_list[1])
    # The branching logic is the same for these two fields, so assign hidden state to a single variable.

    if (
            not hidden
    ):  # Only perform check if the fields are not hidden by branching logic in IPSS.
        # defvsposseizure___1 = 1  <=>  seizind = 1
        if (def___1_1 == "1") and (seizind_2 != "1"):
            element_bad = True
        elif (seizind_2 == "1") and (def___1_1 != "1"):
            element_bad = True

        # defvsposseizure___3 = 1  <=>  seizinde = 1
        if (def___3_1 == "1") and (seizinde_2 != "1"):
            element_bad = True
        elif (seizinde_2 == "1") and (def___3_1 != "1"):
            element_bad = True

        # defvsposseizure___4 = 1  <=>  seizind = 2
        if (def___4_1 == "1") and (seizind_2 != "2"):
            element_bad = True
        elif (seizind_2 == "2") and (def___4_1 != "1"):
            element_bad = True

        # defvsposseizure___5 = 1  <=>  seizinde = 2
        if (def___5_1 == "1") and (seizinde_2 != "2"):
            element_bad = True
        elif (seizinde_2 == "2") and (def___5_1 != "1"):
            element_bad = True
    return element_bad
Exemple #3
0
def checkFunction(row_index_1, field_name_1, def_field_list, metadata_list,
                  records_list, record_id_map_list,
                  repeating_forms_events_list, form_repetition_map_list):
    element_bad = False

    # Get values from first project.
    row_1 = records_list[0][row_index_1]
    record_id = row_1[def_field_list[0]]
    bpdate_v2_1 = row_1["bpdate_v2"]

    # Get values from second project
    event_2 = "acute_arm_1"
    instance_2 = None

    seizur___1_2, hidden = getEntryLR(record_id, event_2, instance_2,
                                      "seizur___1", records_list[1],
                                      record_id_map_list[1], metadata_list[1],
                                      form_repetition_map_list[1])

    if (bpdate_v2_1 == "1") and (seizur___1_2 != "1"):
        element_bad = True
    elif ((bpdate_v2_1 == "0") or
          (bpdate_v2_1 == "")) and (seizur___1_2 == "1"):
        element_bad = True
    return element_bad
Exemple #4
0
def checkFunction(row_index, field_name, def_field, metadata, records, record_id_map, repeating_forms_events, form_repetition_map):
    element_bad = False # Assume good until flaw found.

    field = metadata[field_name]
    row = records[row_index]
    record_id = row[def_field]
    event_name = row['redcap_event_name']
    instance = row['redcap_repeat_instance']
    if (instance == ''):
        instance = None

    value, hidden = getEntryLR(record_id, event_name, instance, field_name, records, record_id_map, metadata, form_repetition_map)

    if (hidden):
        if (field.field_type == "checkbox"):
            if (field_name == field.choices[0]): # Perform check when the first checkbox option is found.
                all_boxes_blank = True # Assume all blank until nonblank option found.
                for choice_field_name in field.choices: # Loop over the other checkbox options.
                    if (row[choice_field_name] == '1'):
                        all_boxes_blank = False
                        break
    
                # WON'T WORK IF FIELD NAME IS 'foo___var_name___1'.
                if (not all_boxes_blank):
                    element_bad = True
    
        elif (value != ""):
            element_bad = True
    return element_bad
Exemple #5
0
def checkFunction(row_index_1, field_name_1, def_field_list, metadata_list, records_list, record_id_map_list, repeating_forms_events_list, form_repetition_map_list):
    element_bad = False
    
    # Get values from first project.
    row_1 = records_list[0][row_index_1]
    record_id = row_1[def_field_list[0]]
    vstetiol = row_1["vstetiol"]

    # Get values from second project.
    event_2 = "acute_arm_1"
    instance_2 = None

    othtreti, othtreti_hidden = getEntryLR(record_id, event_2, instance_2, "othtreti", records_list[1], record_id_map_list[1], metadata_list[1], form_repetition_map_list[1])
    ster, ster_hidden = getEntryLR(record_id, event_2, instance_2, "ster", records_list[1], record_id_map_list[1], metadata_list[1], form_repetition_map_list[1])
    acyclo, acyclo_hidden = getEntryLR(record_id, event_2, instance_2, "acyclo", records_list[1], record_id_map_list[1], metadata_list[1], form_repetition_map_list[1])    

    if (vstetiol == '1'):
        if (othtreti == '') or ((ster == '') and (not ster_hidden)) or ((acyclo == '') and (not acyclo_hidden)):
            element_bad = True

    return element_bad
Exemple #6
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def rowConditions(row_index, def_field, metadata, records, record_id_map, repeating_forms_events, form_repetition_map):
    record_id = records[row_index][def_field]
    event = "acute_arm_1"
    instance = None
    field_name = "substud___4"

    # Only check row if record is in SIPS II
    in_sips2, hidden  = getEntryLR(record_id, event, instance, field_name, records, record_id_map, metadata, form_repetition_map)
    if (in_sips2 == "1"):
        check_row = True
    else:
        check_row = False
    return check_row
Exemple #7
0
def checkFunction(row_index_1, field_name_1, def_field_list, metadata_list, records_list, record_id_map_list, repeating_forms_events_list, form_repetition_map_list):
    element_bad = False
    
    # Get values from first project.
    row_1 = records_list[0][row_index_1]
    record_id = row_1[def_field_list[0]]
    fhstrkyng = row_1["fhstrkyng"]

    # Get values from second project.
    event_2 = "acute_arm_1"
    instance_2 = None

    hstroke, hstroke_hidden = getEntryLR(record_id, event_2, instance_2, "hstroke", records_list[1], record_id_map_list[1], metadata_list[1], form_repetition_map_list[1])

    if (fhstrkyng == '1'):
        if (hstroke != '1'):
            element_bad = True

    return element_bad
Exemple #8
0
def checkFunction(row_index_1, field_name_1, def_field_list, metadata_list, records_list, record_id_map_list, repeating_forms_events_list, form_repetition_map_list):
    element_bad = False
    
    # Get values from first project.
    row_1 = records_list[0][row_index_1]
    record_id = row_1[def_field_list[0]]
    earinf = row_1["earinf"]

    # Get values from second project.
    event_2 = "acute_arm_1"
    instance_2 = None

    infectmi___2, infectmi___2_hidden = getEntryLR(record_id, event_2, instance_2, "infectmi___2", records_list[1], record_id_map_list[1], metadata_list[1], form_repetition_map_list[1])

    err1 = (earinf == '1') and (infectmi___2 != '1')
    err2 = (earinf == '0') and (infectmi___2 != '0')
    err3 = (infectmi___2 == '1') and (earinf != '1')
#    err4 = (infectmi___2 == '0') and (earinf != '0') # do not count as an error because an unchecked checkbox could be missing data.

    if err1 or err2 or err3:
        element_bad = True

    return element_bad
Exemple #9
0
def checkFunction(row_index_1, field_name_1, def_field_list, metadata_list,
                  records_list, record_id_map_list,
                  repeating_forms_events_list, form_repetition_map_list):
    element_bad = False

    # Get values from first project.
    row_1 = records_list[0][row_index_1]
    record_id = row_1[def_field_list[0]]
    medications_1 = row_1["medications"]

    # Get values from second project.
    event_2 = "acute_arm_1"
    instance_2 = None

    anticonv_2, hidden = getEntryLR(record_id, event_2, instance_2, "anticonv",
                                    records_list[1], record_id_map_list[1],
                                    metadata_list[1],
                                    form_repetition_map_list[1])

    if (medications_1 == "1"):
        if (anticonv_2 != "1"):
            element_bad = True
    return element_bad