def dipole_fit():
mu.add_mmvt_code_root_to_path()
from src.preproc import meg
importlib.reload(meg)
subject = mu.get_user()
args = meg.read_cmd_args(
dict(subject=subject, mri_subject=subject, atlas=mu.get_atlas()))
meg.init(subject, args)
dipoles_times = [(bpy.context.scene.meg_dipole_fit_tmin,
bpy.context.scene.meg_dipole_fit_tmax)]
dipoloes_title = mask_roi = MEGPanel.current_cluster['intersects'][0][
'name']
meg.dipoles_fit(dipoles_times,
dipoloes_title,
None,
mu.get_real_fname('meg_noise_cov_fname'),
mu.get_real_fname('meg_evoked_fname'),
mu.get_real_fname('head_to_mri_trans_mat_fname'),
5.,
bpy.context.scene.meg_dipole_fit_use_meg,
bpy.context.scene.meg_dipole_fit_use_eeg,
mask_roi=mask_roi,
do_plot=False,
n_jobs=4)
def init(addon_prefs):
set_play_to(get_max_time_steps())
mmvt_utils.view_all_in_graph_editor(bpy.context)
bpy.context.window.screen = bpy.data.screens['Neuro']
bpy.context.scene.atlas = mmvt_utils.get_atlas()
bpy.context.scene.python_cmd = addon_prefs.python_cmd
# set default values
figures_fol = op.join(mmvt_utils.get_user_fol(), 'figures')
mmvt_utils.make_dir(figures_fol)
set_render_output_path(figures_fol)
set_render_quality(60)
mmvt_utils.set_show_textured_solid()
code_fol = mmvt_utils.get_parent_fol(mmvt_utils.get_parent_fol())
os.chdir(code_fol)
def init(addon_prefs):
set_play_to(get_max_time_steps())
mmvt_utils.view_all_in_graph_editor(bpy.context)
bpy.context.window.screen = bpy.data.screens['Neuro']
bpy.context.scene.atlas = mmvt_utils.get_atlas()
bpy.context.scene.python_cmd = addon_prefs.python_cmd
# set default values
figures_fol = op.join(mmvt_utils.get_user_fol(), 'figures')
mmvt_utils.make_dir(figures_fol)
set_render_output_path(figures_fol)
set_render_quality(60)
mmvt_utils.set_show_textured_solid()
mmvt_utils.hide_relationship_lines()
code_fol = mmvt_utils.get_parent_fol(mmvt_utils.get_parent_fol())
os.chdir(code_fol)
def main(addon_prefs=None):
show_electrodes(False)
show_connections(False)
mmvt_utils.view_all_in_graph_editor(bpy.context)
bpy.context.window.screen = bpy.data.screens['Neuro']
bpy.context.scene.atlas = mmvt_utils.get_atlas()
bpy.context.scene.python_cmd = addon_prefs.python_cmd
# set default values
figures_fol = op.join(mmvt_utils.get_user_fol(), 'figures')
mmvt_utils.make_dir(figures_fol)
set_render_output_path(figures_fol)
set_render_quality(60)
code_fol = mmvt_utils.get_parent_fol(mmvt_utils.get_parent_fol())
os.chdir(code_fol)
try:
# _listener_in_queue, _listener__out_queue = start_listener()
current_module = sys.modules[__name__]
appearance_panel.init(current_module)
show_hide_panel.init(current_module)
selection_panel.init(current_module)
coloring_panel.init(current_module)
electrodes_panel.init(current_module)
play_panel.init(current_module)
filter_panel.init(current_module)
freeview_panel.init(current_module, addon_prefs)
render_panel.init(current_module)
fMRI_panel.init(current_module)
search_panel.init(current_module)
transparency_panel.init(current_module)
where_am_i_panel.init(current_module)
data_panel.init(current_module)
stim_panel.init(current_module)
dti_panel.init(current_module)
connections_panel.init(current_module)
# listener_panel.init(current_module)
vertex_data_panel.init(current_module)
except:
print('The classes are already registered!')
print(traceback.format_exc())
show_activity()
def init(addon_prefs):
global settings
run_faulthandler()
print('filepath: {}'.format(bpy.data.filepath))
set_play_to(get_max_time_steps())
mmvt_utils.view_all_in_graph_editor(bpy.context)
bpy.context.window.screen = bpy.data.screens['Neuro']
bpy.context.scene.atlas = mmvt_utils.get_atlas()
bpy.context.scene.python_cmd = addon_prefs.python_cmd
# bpy.data.screens['Neuro'].areas[1].spaces[0].region_3d.view_rotation = [1, 0, 0, 0]
make_all_fcurve_visible()
# set default values
figures_fol = op.join(mmvt_utils.get_user_fol(), 'figures')
mmvt_utils.make_dir(figures_fol)
set_render_output_path(figures_fol)
set_render_quality(60)
mmvt_utils.set_show_textured_solid()
mmvt_utils.hide_relationship_lines()
code_fol = mmvt_utils.get_parent_fol(mmvt_utils.get_parent_fol())
settings = mmvt_utils.read_config_ini()
os.chdir(code_fol)
bpy.context.scene.mmvt_initialized = True