Exemple #1
0
def test_1_3_aromatic_heteroatom_canonicalization3():
    """1,3 aromatic heteroatom H shift"""
    eq_(canonicalize_tautomer_smiles('Oc1ncc[nH]1'), 'O=c1[nH]cc[nH]1')
Exemple #2
0
def test_keten_ynol_canonicalization2():
    """keten/ynol tautomer"""
    assert canonicalize_tautomer_smiles('CC#CO') == 'CC=C=O'
Exemple #3
0
def test_cyano_iso_cyanic_acid_canonicalization2():
    """cyano/iso-cyanic acid tautomer"""
    assert canonicalize_tautomer_smiles('C(=N)=O') == 'N=C=O'
Exemple #4
0
def test_1_7_aromatic_heteroatom_canonicalization2():
    """1,7 aromatic heteroatom H shift"""
    assert canonicalize_tautomer_smiles('c1ccc2c(c1)NC(=C1N=c3ccccc3=N1)N2') == 'c1ccc2[nH]c(-c3nc4ccccc4[nH]3)nc2c1'
Exemple #5
0
def test_heterocyclic_canonicalization4():
    """heterocyclic tautomer"""
    assert canonicalize_tautomer_smiles('n1ccc2c[nH]ccc12') == 'c1cc2[nH]ccc2cn1'
Exemple #6
0
def test_1_5_aromatic_heteroatom_canonicalization4():
    """1,5 aromatic heteroatom H shift"""
    assert canonicalize_tautomer_smiles('Cc1nnc2nc[nH]n12') == 'Cc1n[nH]c2ncnn12'
Exemple #7
0
def test_1_5_aromatic_heteroatom_canonicalization9():
    """1,5 aromatic heteroatom H shift"""
    assert canonicalize_tautomer_smiles('Oc1n(C)ncc1') == 'Cn1[nH]ccc1=O'
Exemple #8
0
def test_1_5_aromatic_heteroatom_canonicalization6():
    """1,5 aromatic heteroatom H shift"""
    eq_(canonicalize_tautomer_smiles('Oc1c(cccc3)c3nc2ccncc12'), 'O=c1c2ccccc2[nH]c2ccncc12')
Exemple #9
0
def test_1_3_1_5_aromatic_heteroatom_canonicalization():
    """1,3 and 1,5 aromatic heteroatom H shift"""
    eq_(canonicalize_tautomer_smiles('Oc1ncncc1'), 'O=c1cc[nH]cn1')
Exemple #10
0
def test_1_3_heteroatom_canonicalization6():
    """1,3 heteroatom H shift"""
    eq_(canonicalize_tautomer_smiles('CN=c1[nH]cncc1'), 'CN=c1cc[nH]cn1')
Exemple #11
0
def test_1_5_aromatic_heteroatom_canonicalization4():
    """1,5 aromatic heteroatom H shift"""
    eq_(canonicalize_tautomer_smiles('Cc1nnc2nc[nH]n12'), 'Cc1n[nH]c2ncnn12')
Exemple #12
0
def test_1_3_heteroatom_canonicalization5():
    """1,3 heteroatom H shift"""
    eq_(canonicalize_tautomer_smiles('N=c1[nH]ccn(C)1'), 'Cn1cc[nH]c1=N')
Exemple #13
0
def test_1_3_heteroatom_canonicalization4():
    """1,3 heteroatom H shift"""
    eq_(canonicalize_tautomer_smiles('SC(N)=N'), 'NC(N)=S')
Exemple #14
0
def test_1_3_heteroatom_canonicalization2():
    """1,3 heteroatom H shift"""
    eq_(canonicalize_tautomer_smiles('CNC(C)=O'), 'CNC(C)=O')
Exemple #15
0
def test_1_3_heteroatom_canonicalization2():
    """1,3 heteroatom H shift"""
    assert canonicalize_tautomer_smiles('CNC(C)=O') == 'CNC(C)=O'
Exemple #16
0
def test_1_5_aromatic_heteroatom_canonicalization8():
    """1,5 aromatic heteroatom H shift"""
    eq_(canonicalize_tautomer_smiles('C2(C1=C([NH]C=N1)[NH]C(=N2)N)=O'), 'N=c1[nH]c(=O)c2[nH]cnc2[nH]1')
Exemple #17
0
def test_1_3_heteroatom_canonicalization5():
    """1,3 heteroatom H shift"""
    assert canonicalize_tautomer_smiles('N=c1[nH]ccn(C)1') == 'Cn1cc[nH]c1=N'
Exemple #18
0
def test_1_5_aromatic_heteroatom_canonicalization9():
    """1,5 aromatic heteroatom H shift"""
    eq_(canonicalize_tautomer_smiles('Oc1n(C)ncc1'), 'Cn1[nH]ccc1=O')
Exemple #19
0
def test_1_3_1_5_aromatic_heteroatom_canonicalization():
    """1,3 and 1,5 aromatic heteroatom H shift"""
    assert canonicalize_tautomer_smiles('Oc1ncncc1') == 'O=c1cc[nH]cn1'
Exemple #20
0
def test_1_5_aromatic_heteroatom_canonicalization10():
    """1,5 aromatic heteroatom H shift"""
    eq_(canonicalize_tautomer_smiles('O=c1nc2[nH]ccn2cc1'), 'O=c1ccn2cc[nH]c2n1')
Exemple #21
0
def test_1_5_aromatic_heteroatom_canonicalization12():
    """1,5 aromatic heteroatom H shift"""
    assert canonicalize_tautomer_smiles('N=c(c1)ccn2cc[nH]c12') == 'N=c1ccn2cc[nH]c2c1'
Exemple #22
0
def test_1_5_aromatic_heteroatom_canonicalization12():
    """1,5 aromatic heteroatom H shift"""
    eq_(canonicalize_tautomer_smiles('N=c(c1)ccn2cc[nH]c12'), 'N=c1ccn2cc[nH]c2c1')
Exemple #23
0
def test_1_11_aromatic_heteroatom_canonicalization2():
    """1,11 aromatic heteroatom H shift"""
    assert canonicalize_tautomer_smiles('N=C1C=CC(=Cc2ccc(O)cc2)C=C1') == 'Nc1ccc(C=C2C=CC(=O)C=C2)cc1'
Exemple #24
0
def test_1_5_aromatic_heteroatom_canonicalization13():
    """1,5 aromatic heteroatom H shift"""
    eq_(canonicalize_tautomer_smiles('CN=c1nc[nH]cc1'), 'CN=c1cc[nH]cn1')
Exemple #25
0
def test_furanone_canonicalization():
    """furanone tautomer"""
    assert canonicalize_tautomer_smiles('C1=CC=C(O1)O') == 'Oc1ccco1'
Exemple #26
0
def test_1_7_aromatic_heteroatom_canonicalization2():
    """1,7 aromatic heteroatom H shift"""
    eq_(canonicalize_tautomer_smiles('c1ccc2c(c1)NC(=C1N=c3ccccc3=N1)N2'), 'c1ccc2[nH]c(-c3nc4ccccc4[nH]3)nc2c1')
Exemple #27
0
def test_oxim_nitroso_canonicalization2():
    """oxim nitroso tautomer"""
    assert canonicalize_tautomer_smiles('CC(C)N=O') == 'CC(C)=NO'
Exemple #28
0
def test_1_9_aromatic_heteroatom_canonicalization2():
    """1,9 aromatic heteroatom H shift"""
    eq_(canonicalize_tautomer_smiles('CN=c1ccnc2nc[nH]n21'), 'CN=c1cc[nH]c2ncnn12')
Exemple #29
0
def test_isocyanide_canonicalization2():
    """isocyanide tautomer"""
    assert canonicalize_tautomer_smiles('[C-]#[NH+]') == 'C#N'
Exemple #30
0
def test_1_11_aromatic_heteroatom_canonicalization2():
    """1,11 aromatic heteroatom H shift"""
    eq_(canonicalize_tautomer_smiles('N=C1C=CC(=Cc2ccc(O)cc2)C=C1'), 'Nc1ccc(C=C2C=CC(=O)C=C2)cc1')
Exemple #31
0
def test_1_3_aromatic_heteroatom_canonicalization3():
    """1,3 aromatic heteroatom H shift"""
    assert canonicalize_tautomer_smiles('Oc1ncc[nH]1') == 'O=c1[nH]cc[nH]1'
Exemple #32
0
def test_heterocyclic_canonicalization2():
    """heterocyclic tautomer"""
    eq_(canonicalize_tautomer_smiles('c1cc(=O)[nH]c2nccn12'), 'O=c1ccn2cc[nH]c2n1')
Exemple #33
0
def test_1_3_heteroatom_canonicalization4():
    """1,3 heteroatom H shift"""
    assert canonicalize_tautomer_smiles('SC(N)=N') == 'NC(N)=S'
Exemple #34
0
def test_heterocyclic_canonicalization4():
    """heterocyclic tautomer"""
    eq_(canonicalize_tautomer_smiles('n1ccc2c[nH]ccc12'), 'c1cc2[nH]ccc2cn1')
Exemple #35
0
def test_1_3_heteroatom_canonicalization6():
    """1,3 heteroatom H shift"""
    assert canonicalize_tautomer_smiles('CN=c1[nH]cncc1') == 'CN=c1cc[nH]cn1'
Exemple #36
0
def test_heterocyclic_canonicalization5():
    """heterocyclic tautomer"""
    eq_(canonicalize_tautomer_smiles('c1cnc2ccc[nH]c12'), 'c1cnc2cc[nH]c2c1')
Exemple #37
0
def test_1_5_aromatic_heteroatom_canonicalization6():
    """1,5 aromatic heteroatom H shift"""
    assert canonicalize_tautomer_smiles('Oc1c(cccc3)c3nc2ccncc12') == 'O=c1c2ccccc2[nH]c2ccncc12'
Exemple #38
0
def test_furanone_canonicalization():
    """furanone tautomer"""
    eq_(canonicalize_tautomer_smiles('C1=CC=C(O1)O'), 'Oc1ccco1')
Exemple #39
0
def test_1_5_aromatic_heteroatom_canonicalization8():
    """1,5 aromatic heteroatom H shift"""
    assert canonicalize_tautomer_smiles('C2(C1=C([NH]C=N1)[NH]C(=N2)N)=O') == 'N=c1[nH]c(=O)c2[nH]cnc2[nH]1'
Exemple #40
0
def test_furanone_canonicalization2():
    """furanone tautomer"""
    eq_(canonicalize_tautomer_smiles('O=C1CC=CO1'), 'Oc1ccco1')
Exemple #41
0
def test_1_5_aromatic_heteroatom_canonicalization10():
    """1,5 aromatic heteroatom H shift"""
    assert canonicalize_tautomer_smiles('O=c1nc2[nH]ccn2cc1') == 'O=c1ccn2cc[nH]c2n1'
Exemple #42
0
def test_keten_ynol_canonicalization2():
    """keten/ynol tautomer"""
    eq_(canonicalize_tautomer_smiles('CC#CO'), 'CC=C=O')
Exemple #43
0
def test_1_5_aromatic_heteroatom_canonicalization13():
    """1,5 aromatic heteroatom H shift"""
    assert canonicalize_tautomer_smiles('CN=c1nc[nH]cc1') == 'CN=c1cc[nH]cn1'
Exemple #44
0
def test_ionic_nitro_aci_nitro_canonicalization2():
    """ionic nitro/aci-nitro tautomer"""
    eq_(canonicalize_tautomer_smiles('C(=[N+](O)[O-])C'), 'CC[N+](=O)[O-]')
Exemple #45
0
def test_1_9_aromatic_heteroatom_canonicalization2():
    """1,9 aromatic heteroatom H shift"""
    assert canonicalize_tautomer_smiles('CN=c1ccnc2nc[nH]n21') == 'CN=c1cc[nH]c2ncnn12'
Exemple #46
0
def test_oxim_nitroso_canonicalization2():
    """oxim nitroso tautomer"""
    eq_(canonicalize_tautomer_smiles('CC(C)N=O'), 'CC(C)=NO')
Exemple #47
0
def test_heterocyclic_canonicalization2():
    """heterocyclic tautomer"""
    assert canonicalize_tautomer_smiles('c1cc(=O)[nH]c2nccn12') == 'O=c1ccn2cc[nH]c2n1'
Exemple #48
0
def test_oxim_nitroso_phenol_canonicalization2():
    """oxim/nitroso tautomer via phenol"""
    eq_(canonicalize_tautomer_smiles('O=C1C=CC(=NO)C=C1'), 'O=Nc1ccc(O)cc1')
Exemple #49
0
def test_heterocyclic_canonicalization5():
    """heterocyclic tautomer"""
    assert canonicalize_tautomer_smiles('c1cnc2ccc[nH]c12') == 'c1cnc2cc[nH]c2c1'
Exemple #50
0
def test_cyano_iso_cyanic_acid_canonicalization2():
    """cyano/iso-cyanic acid tautomer"""
    eq_(canonicalize_tautomer_smiles('C(=N)=O'), 'N=C=O')
Exemple #51
0
def test_furanone_canonicalization2():
    """furanone tautomer"""
    assert canonicalize_tautomer_smiles('O=C1CC=CO1') == 'Oc1ccco1'
Exemple #52
0
def test_formamidinesulfinic_acid_canonicalization2():
    """formamidinesulfinic acid tautomer"""
    eq_(canonicalize_tautomer_smiles('N=C(N)S(=O)O'), 'N=C(N)S(=O)O')
Exemple #53
0
def test_ionic_nitro_aci_nitro_canonicalization2():
    """ionic nitro/aci-nitro tautomer"""
    assert canonicalize_tautomer_smiles('C(=[N+](O)[O-])C') == 'CC[N+](=O)[O-]'
Exemple #54
0
def test_isocyanide_canonicalization2():
    """isocyanide tautomer"""
    eq_(canonicalize_tautomer_smiles('[C-]#[NH+]'), 'C#N')
Exemple #55
0
def test_oxim_nitroso_phenol_canonicalization2():
    """oxim/nitroso tautomer via phenol"""
    assert canonicalize_tautomer_smiles('O=C1C=CC(=NO)C=C1') == 'O=Nc1ccc(O)cc1'
Exemple #56
0
def test_phosphonic_acid_canonicalization2():
    """phosphonic acid tautomer"""
    eq_(canonicalize_tautomer_smiles('P(O)(O)O'), 'O=[PH](O)O')
Exemple #57
0
def test_formamidinesulfinic_acid_canonicalization2():
    """formamidinesulfinic acid tautomer"""
    assert canonicalize_tautomer_smiles('N=C(N)S(=O)O') == 'N=C(N)S(=O)O'
Exemple #58
0
def test_special_imine_canonicalization2():
    """special imine tautomer"""
    assert canonicalize_tautomer_smiles('C1(=NC=CC=C1)CC') == 'CCc1ccccn1'
Exemple #59
0
def test_phosphonic_acid_canonicalization2():
    """phosphonic acid tautomer"""
    assert canonicalize_tautomer_smiles('P(O)(O)O') == 'O=[PH](O)O'
Exemple #60
0
def test_special_imine_canonicalization2():
    """special imine tautomer"""
    eq_(canonicalize_tautomer_smiles('C1(=NC=CC=C1)CC'), 'CCc1ccccn1')