def register_thermo_com_net(path):
'''Register a bundle of Thermo's RawFileReader library's DLLs. The `--path` option can
be used to specify additional search paths.
'''
if path is None:
path = []
try:
import clr
except ImportError:
click.secho("pythonnet not installed", fg='yellow')
raise click.ClickException(
"This feature requires the pythonnet library. Please install it.")
from ms_deisotope.data_source.thermo_raw_net import _register_dll, _RawFileReader
from ms_deisotope.data_source.thermo_raw_net import determine_if_available
if _RawFileReader:
click.secho("DLL Already Registered and Loaded")
return
result = _register_dll(path)
if result:
click.secho("DLL Registration Successful")
if determine_if_available():
click.secho("DLL Load Succesful", fg='cyan')
if path is not None:
config = get_config()
rest = sorted(set(path) - set(config['vendor_readers']['thermo-net']))
config['vendor_readers']['thermo-net'].extend(rest)
save_config(config)
else:
click.secho("DLL Load Unsuccessful", fg='red')
else:
click.secho("DLL Registration Unsuccessful")
def register_waters_masslynx(path):
if path is None:
path = []
from ms_deisotope.data_source._vendor.masslynx import libload
path = list(map(os.path.abspath, path))
result = libload._register_dll(path)
if result:
click.secho("DLL Registration Successful")
out = libload.determine_if_available()
if out:
click.secho("DLL Load Succesful", fg='cyan')
if path is not None:
config = get_config()
config.setdefault('vendor_readers', {})
config['vendor_readers'].setdefault("waters-masslynx", [])
rest = sorted(
set(path) - set(
config.get('vendor_readers', {}).get(
'waters-masslynx', [])))
config['vendor_readers']['waters-masslynx'].extend(rest)
save_config(config)
else:
click.secho("DLL Load Unsuccessful", fg='red')
else:
click.secho("DLL Registration Unsuccessful")
def register_thermo_com(path=None):
'''Register an installed MSFileReader or XRawFile DLL. Searches the standard installation
paths, but the `--path` option can be used to specify additional search paths.
'''
if path is None:
path = []
try:
import comtypes
except ImportError:
click.secho("comtypes not installed", fg='yellow')
raise click.ClickException(
"This feature requires the comtypes library. Please install it.")
import logging
from ms_deisotope.data_source._vendor.MSFileReader import _register_dll, log, DLL_IS_LOADED
from ms_deisotope.data_source.thermo_raw import determine_if_available
if DLL_IS_LOADED:
click.secho("DLL Already Registered and Loaded")
return
if log is not None:
log.addHandler(logging.StreamHandler())
log.setLevel('DEBUG')
result = _register_dll(path)
if result:
click.secho("DLL Registration Successful")
if determine_if_available():
click.secho("DLL Load Succesful", fg='cyan')
if path is not None:
config = get_config()
config['vendor_readers']['thermo-com'].extend(path)
save_config(config)
else:
click.secho("DLL Load Unsuccessful", fg='red')
else:
click.secho("DLL Registration Unsuccessful")
if log is not None:
log.handlers = log.handlers[:-1]
