def createIngestJob(self, user_id, config_data):
"""Create an ingest job based on the posted config data"""
config_data = json.loads(config_data)
# validate schema
if self.validateConfig(config_data):
try:
# create the upload queue
UploadQueue.createQueue(
self.nd_proj, endpoint_url=ndingest_settings.SQS_ENDPOINT)
self.upload_queue = UploadQueue(
self.nd_proj, endpoint_url=ndingest_settings.SQS_ENDPOINT)
self.ingest_job.upload_queue = self.upload_queue.url
# create the ingest queue
IngestQueue.createQueue(
self.nd_proj, endpoint_url=ndingest_settings.SQS_ENDPOINT)
self.ingest_job.ingest_queue = IngestQueue(
self.nd_proj,
endpoint_url=ndingest_settings.SQS_ENDPOINT).url
# create the cleanup queue
CleanupQueue.createQueue(
self.nd_proj, endpoint_url=ndingest_settings.SQS_ENDPOINT)
self.ingest_job.cleanup_queue = CleanupQueue(
self.nd_proj,
endpoint_url=ndingest_settings.SQS_ENDPOINT).url
self.generateUploadTasks()
self.ingest_job.user_id = user_id
self.ingest_job.save()
return NDIngestJob.serialize(self.ingest_job._job)
except Exception as e:
print(e)
raise NDWSError(e)
def test_create_queue_with_default_name(sqs):
from ndingest.ndqueue.uploadqueue import UploadQueue
proj = generate_proj()
# Create upload queue.
UploadQueue.createQueue(proj)
upload_queue = UploadQueue(proj)
# Create dead letter queue with default name.
exp_max_receives = 4
dl_queue = upload_queue.addDeadLetterQueue(exp_max_receives)
exp_name = upload_queue.queue_name + "-dlq"
exp_arn = dl_queue.attributes["QueueArn"]
try:
policy = json.loads(upload_queue.queue.attributes["RedrivePolicy"])
assert exp_max_receives == policy["maxReceiveCount"]
assert exp_arn == policy["deadLetterTargetArn"]
# Confirm dead letter queue named correctly by looking at the end
# of its ARN.
assert dl_queue.attributes["QueueArn"].endswith(exp_name)
finally:
dl_queue.delete()
def test_delete_dead_letter_queue(sqs):
from ndingest.ndqueue.uploadqueue import NDQueue
from ndingest.ndqueue.uploadqueue import UploadQueue
proj = generate_proj()
# Create existing queue for dead letter queue.
queue_name = "deadletter_test_{}".format(randint(1000, 9999))
existing_queue = sqs.create_queue(
QueueName=queue_name,
Attributes={
"DelaySeconds": "0",
"MaximumMessageSize": "262144"
},
)
# Create upload queue.
arn = existing_queue.attributes["QueueArn"]
UploadQueue.createQueue(proj)
upload_queue = UploadQueue(proj)
# Attach the dead letter queue to it.
dl_queue = upload_queue.addDeadLetterQueue(2, arn)
# Invoke the delete method.
NDQueue.deleteDeadLetterQueue(sqs, upload_queue.queue)
# Confirm deletion.
with pytest.raises(botocore.exceptions.ClientError):
sqs.get_queue_by_name(QueueName=queue_name)
def test_sendBatchMessages(sqs):
fake_data0 = {"foo": "bar"}
fake_data1 = {"john": "doe"}
jsonized0 = json.dumps(fake_data0)
jsonized1 = json.dumps(fake_data1)
md5_0 = hashlib.md5(jsonized0.encode("utf-8")).hexdigest()
md5_1 = hashlib.md5(jsonized1.encode("utf-8")).hexdigest()
proj = generate_proj()
from ndingest.ndqueue.uploadqueue import UploadQueue
UploadQueue.createQueue(proj)
upload_queue = UploadQueue(proj)
try:
response = upload_queue.sendBatchMessages([jsonized0, jsonized1], 0)
assert "Successful" in response
success_ids = []
for msg_result in response["Successful"]:
id = msg_result["Id"]
success_ids.append(id)
if id == "0":
assert md5_0 == msg_result["MD5OfMessageBody"]
elif id == "1":
assert md5_1 == msg_result["MD5OfMessageBody"]
assert "0" in success_ids
assert "1" in success_ids
finally:
for message_id, receipt_handle, _ in upload_queue.receiveMessage():
upload_queue.deleteMessage(message_id, receipt_handle)
def test_delete_dead_letter_queue(self):
# Create existing queue for dead letter queue.
sqs = boto3.resource(
'sqs',
region_name=settings.REGION_NAME,
endpoint_url=self.endpoint_url,
aws_access_key_id=settings.AWS_ACCESS_KEY_ID,
aws_secret_access_key=settings.AWS_SECRET_ACCESS_KEY)
queue_name = 'deadletter_test_{}'.format(randint(100, 999))
existing_queue = sqs.create_queue(QueueName=queue_name,
Attributes={
'DelaySeconds': '0',
'MaximumMessageSize': '262144'
})
# Create upload queue.
arn = existing_queue.attributes['QueueArn']
UploadQueue.createQueue(self.nd_proj, endpoint_url=self.endpoint_url)
self.upload_queue = UploadQueue(self.nd_proj,
endpoint_url=self.endpoint_url)
# Attach the dead letter queue to it.
dl_queue = self.upload_queue.addDeadLetterQueue(2, arn)
# Invoke the delete method.
NDQueue.deleteDeadLetterQueue(sqs, self.upload_queue.queue)
# Confirm deletion.
with self.assertRaises(botocore.exceptions.ClientError):
sqs.get_queue_by_name(QueueName=queue_name)
def create_upload_queue(self):
"""
Returns:
"""
UploadQueue.createQueue(self.nd_proj, endpoint_url=None)
queue = UploadQueue(self.nd_proj, endpoint_url=None)
return queue
def create_upload_queue(self):
"""
Create an upload queue for an ingest job using the ndingest library
Returns:
UploadQueue : Returns a upload queue object
"""
UploadQueue.createQueue(self.nd_proj, endpoint_url=None)
queue = UploadQueue(self.nd_proj, endpoint_url=None)
return queue
def create_upload_queue(self):
"""
Create an upload queue for an ingest job using the ndingest library
Returns:
UploadQueue : Returns a upload queue object
"""
UploadQueue.createQueue(self.nd_proj, endpoint_url=None)
queue = UploadQueue(self.nd_proj, endpoint_url=None)
return queue
def setUpClass(cls):
# Suppress warnings about Boto3's unclosed sockets.
warnings.simplefilter('ignore')
# Use ndingest in test mode.
os.environ['NDINGEST_TEST'] = '1'
cls.job_id = 125
cls.nd_proj = BossIngestProj('testCol', 'kasthuri11', 'image', 0, cls.job_id)
UploadQueue.createQueue(cls.nd_proj)
cls.upload_queue = UploadQueue(cls.nd_proj)
def setUpClass(cls):
# Suppress warnings about Boto3's unclosed sockets.
warnings.simplefilter('ignore')
# Use ndingest in test mode.
os.environ['NDINGEST_TEST'] = '1'
cls.job_id = 125
cls.nd_proj = BossIngestProj('testCol', 'kasthuri11', 'image', 0,
cls.job_id)
UploadQueue.createQueue(cls.nd_proj)
cls.upload_queue = UploadQueue(cls.nd_proj)
def populateQueue(self, tile_size=1024, time_interval=1):
"""Populate the message queue"""
# setup the queue
queue_name = UploadQueue.createQueue([self.proj.getProjectName(), self.channel, str(self.resolution)])
upload_queue = UploadQueue([self.proj.getProjectName(), self.channel, str(self.resolution)])
# load the image sizes
[[ximage_size, yimage_size, zimage_size],(start_time, end_time)] = self.proj.datasetcfg.imageSize(self.resolution)
# load the image offsets
[x_offset, y_offset, z_offset] = self.proj.datasetcfg.getOffset()[self.resolution]
# calculate the number of tiles
# TODO KL account for xoffset and yoffset here
num_xtiles = ximage_size / tile_size
num_ytiles = yimage_size / tile_size
# iterate over time
for time in range(start_time, end_time+1, time_interval):
# iterate over the x and y range
for ytile in range(0, num_ytiles, 1):
for xtile in range(0, num_xtiles, 1):
# iterate over zrange
for ztile in range(z_offset, zimage_size, 1):
time_range = None if end_time - start_time == 0 else [time, time_interval]
# generate a message for each one
print("inserting message:x{}y{}z{}".format(xtile, ytile, ztile))
message = UploadMessage.encode(self.proj.getProjectName(), self.channel, self.resolution, xtile, ytile, ztile, time_range)
response = upload_queue.sendMessage(message)
print(response)
return queue_name
def setup_class(self):
"""Setup class parameters"""
# create the tile index table. skip if it exists
try:
TileIndexDB.createTable(endpoint_url=settings.DYNAMO_ENDPOINT)
except Exception as e:
pass
self.tileindex_db = TileIndexDB(nd_proj.project_name,
endpoint_url=settings.DYNAMO_ENDPOINT)
# create the ingest queue
IngestQueue.createQueue(nd_proj, endpoint_url=settings.SQS_ENDPOINT)
# create the upload queue
UploadQueue.createQueue(nd_proj, endpoint_url=settings.SQS_ENDPOINT)
self.upload_queue = UploadQueue(nd_proj,
endpoint_url=settings.SQS_ENDPOINT)
tile_bucket = TileBucket(nd_proj.project_name,
endpoint_url=settings.S3_ENDPOINT)
[self.x_tile, self.y_tile, self.z_tile] = [0, 0, 0]
message = serializer.encodeUploadMessage(
nd_proj.project_name,
nd_proj.channel_name,
nd_proj.resolution,
self.x_tile,
self.y_tile,
self.z_tile,
)
# insert message in the upload queue
self.upload_queue.sendMessage(message)
# receive message and upload object
for (
message_id,
receipt_handle,
message_body,
) in self.upload_queue.receiveMessage():
tile_handle = cStringIO.StringIO()
tile_bucket.putObject(
tile_handle,
nd_proj.channel_name,
nd_proj.resolution,
self.x_tile,
self.y_tile,
self.z_tile,
message_id,
receipt_handle,
)
def boss_util_fixtures(tile_bucket, sqs):
job_id = 123
nd_proj = BossIngestProj("testCol", "kasthuri11", "image", 0, job_id)
from ndingest.ndqueue.uploadqueue import UploadQueue
UploadQueue.createQueue(nd_proj)
upload_queue = UploadQueue(nd_proj)
from ndingest.ndqueue.tileindexqueue import TileIndexQueue
TileIndexQueue.createQueue(nd_proj)
tile_index_queue = TileIndexQueue(nd_proj)
def get_test_data():
return (nd_proj, upload_queue, tile_index_queue, tile_bucket)
yield get_test_data
UploadQueue.deleteQueue(nd_proj)
TileIndexQueue.deleteQueue(nd_proj)
def test_add_existing_queue_as_dead_letter_queue(self):
# Create existing queue for dead letter queue.
sqs = boto3.resource(
'sqs',
region_name=settings.REGION_NAME,
endpoint_url=self.endpoint_url,
aws_access_key_id=settings.AWS_ACCESS_KEY_ID,
aws_secret_access_key=settings.AWS_SECRET_ACCESS_KEY)
queue_name = 'deadletter_test_{}'.format(randint(100, 999))
existing_queue = sqs.create_queue(QueueName=queue_name,
Attributes={
'DelaySeconds': '0',
'MaximumMessageSize': '262144'
})
exp_arn = existing_queue.attributes['QueueArn']
try:
# Create upload queue.
UploadQueue.createQueue(self.nd_proj,
endpoint_url=self.endpoint_url)
self.upload_queue = UploadQueue(self.nd_proj,
endpoint_url=self.endpoint_url)
# Attach the dead letter queue to it.
exp_max_receives = 5
dl_queue = self.upload_queue.addDeadLetterQueue(
exp_max_receives, exp_arn)
# Confirm policy settings.
policy = json.loads(
self.upload_queue.queue.attributes['RedrivePolicy'])
self.assertEqual(exp_max_receives, policy['maxReceiveCount'])
self.assertEqual(exp_arn, policy['deadLetterTargetArn'])
# Confirm dead letter queue is the one created at the beginning
# of test.
self.assertEqual(existing_queue.url, dl_queue.url)
finally:
existing_queue.delete()
def test_create_queue_with_default_name(self):
# Create upload queue.
UploadQueue.createQueue(self.nd_proj, endpoint_url=self.endpoint_url)
self.upload_queue = UploadQueue(self.nd_proj,
endpoint_url=self.endpoint_url)
# Create dead letter queue with default name.
exp_max_receives = 4
dl_queue = self.upload_queue.addDeadLetterQueue(exp_max_receives)
exp_name = self.upload_queue.queue_name + '_dead_letter'
exp_arn = dl_queue.attributes['QueueArn']
try:
policy = json.loads(
self.upload_queue.queue.attributes['RedrivePolicy'])
self.assertEqual(exp_max_receives, policy['maxReceiveCount'])
self.assertEqual(exp_arn, policy['deadLetterTargetArn'])
# Confirm dead letter queue named correctly by looking at the end
# of its ARN.
self.assertTrue(dl_queue.attributes['QueueArn'].endswith(exp_name))
finally:
dl_queue.delete()
def test_message(sqs):
"""Test put, get and delete Message"""
x_tile = 0
y_tile = 0
proj = generate_proj()
from ndingest.ndqueue.uploadqueue import UploadQueue
UploadQueue.createQueue(proj)
upload_queue = UploadQueue(proj)
for z_tile in range(0, 2, 1):
# encode the message
message = serializer.encodeUploadMessage(
proj.project_name,
proj.channel_name,
proj.resolution,
x_tile,
y_tile,
z_tile,
)
# send message to the queue
upload_queue.sendMessage(message)
# receive message from the queue
for message_id, receipt_handle, message_body in upload_queue.receiveMessage(
number_of_messages=3
):
# check if we get the tile_info back correctly
assert message_body["z_tile"] in [0, 1, 2]
# delete message from the queue
response = upload_queue.deleteMessage(message_id, receipt_handle)
# check if the message was sucessfully deleted
assert "Successful" in response
def test_add_existing_queue_as_dead_letter_queue(sqs):
from ndingest.ndqueue.uploadqueue import UploadQueue
proj = generate_proj()
# Create existing queue for dead letter queue.
queue_name = "deadletter_test_{}".format(randint(1000, 9999))
existing_queue = sqs.create_queue(
QueueName=queue_name,
Attributes={
"DelaySeconds": "0",
"MaximumMessageSize": "262144"
},
)
exp_arn = existing_queue.attributes["QueueArn"]
try:
# Create upload queue.
UploadQueue.createQueue(proj)
upload_queue = UploadQueue(proj)
# Attach the dead letter queue to it.
exp_max_receives = 5
dl_queue = upload_queue.addDeadLetterQueue(exp_max_receives, exp_arn)
# Confirm policy settings.
policy = json.loads(upload_queue.queue.attributes["RedrivePolicy"])
assert exp_max_receives == policy["maxReceiveCount"]
assert exp_arn == policy["deadLetterTargetArn"]
# Confirm dead letter queue is the one created at the beginning
# of test.
assert existing_queue.url == dl_queue.url
finally:
existing_queue.delete()
def test_createPolicy(sqs, iam):
"""Test policy creation"""
proj = generate_proj()
from ndingest.ndqueue.uploadqueue import UploadQueue
UploadQueue.createQueue(proj)
upload_queue = UploadQueue(proj)
statements = [
{
"Sid": "ReceiveAccessStatement",
"Effect": "Allow",
"Action": ["sqs:ReceiveMessage"],
}
]
expName = upload_queue.generateQueueName(proj)
expDesc = "Test policy creation"
actual = upload_queue.createPolicy(statements, description=expDesc)
try:
assert expName == actual.policy_name
assert expDesc == actual.description
assert settings.IAM_POLICY_PATH == actual.path
# Confirm resource set correctly to the upload queue.
statements = actual.default_version.document["Statement"]
arn = upload_queue.queue.attributes["QueueArn"]
for stmt in statements:
assert stmt["Resource"] == arn
finally:
actual.delete()