def test_phenotype_collection(self):
pc1 = PhenotypeCollection(Phenotype('ilxtr:someValue', 'ilxtr:someDimension'))
pc2 = PhenotypeCollection(Phenotype('ilxtr:someValue', 'ilxtr:someDimension'))
pc3 = PhenotypeCollection(Phenotype('ilxtr:otherValue', 'ilxtr:someDimension'))
pc4 = PhenotypeCollection(Phenotype('ilxtr:otherValue', 'ilxtr:otherDimension'))
assert pc1 == pc2 != pc3 != pc4
pc = PhenotypeCollection(Phenotype('ilxtr:someValue', 'ilxtr:someDimension'),
Phenotype('ilxtr:someValue', 'ilxtr:someDimension'))
assert len(pc) == 1
def test_cell_collection(self):
c1 = simple.AndCell(Phenotype('ilxtr:someValue', 'ilxtr:someDimension'),
Phenotype(ilxtr.someOtherValue, ilxtr.someOtherDimension),)
c2 = simple.OrCell(Phenotype('ilxtr:someValue', 'ilxtr:someDimension'),
Phenotype(ilxtr.someOtherValue, ilxtr.someOtherDimension),)
c3 = simple.EntailedCell(Phenotype('ilxtr:someValue', 'ilxtr:someDimension'),
Phenotype(ilxtr.someOtherValue, ilxtr.someOtherDimension),)
cc = simple.CellCollection()
cc.add(c1, c2, c3)
cc.debug(cc.asNeurdf)
cc.debug(cc.asOwl)
def test_cell_hash_eq_id(self):
c1 = simple.AndCell(Phenotype('ilxtr:someValue', 'ilxtr:someDimension'),
Phenotype(ilxtr.someOtherValue, ilxtr.someOtherDimension),)
c2 = simple.OrCell(Phenotype('ilxtr:someValue', 'ilxtr:someDimension'),
Phenotype(ilxtr.someOtherValue, ilxtr.someOtherDimension),)
assert c1 is not c2
assert c1 != c2
assert len(set((c1, c2))) == 2
c1o = simple.AndCell(Phenotype('ilxtr:someValue', 'ilxtr:someDimension'),
Phenotype(ilxtr.someOtherValue, ilxtr.someOtherDimension),)
assert c1 is not c1o
assert c1 == c1o
ls = len(set((c1, c1o)))
assert ls == 1
def test_entailed_cell(pc):
collect = simple.EntailedCell(
Phenotype('ilxtr:someValue', 'ilxtr:someDimension'),
Phenotype(ilxtr.someOtherValue, ilxtr.someOtherDimension),
)
collect.debug()
def test_phenotype(self):
p1 = Phenotype('ilxtr:someValue', 'ilxtr:someDimension')
p2 = Phenotype('ilxtr:someValue', 'ilxtr:someDimension')
p3 = Phenotype('ilxtr:otherValue', 'ilxtr:someDimension')
p4 = Phenotype('ilxtr:otherValue', 'ilxtr:otherDimension')
assert p1 == p2 != p3 != p4