def __init__(self, head: Sec, neck: Sec, cell: SectionCell, name):
self.cell = cell
cell.connect_secs(source=head, target=neck)
self.hoc_objs = [neck.hoc, head.hoc]
self.head = head
self.neck = neck
self.name = name
def __init__(self, name=None, compile_paths=None):
"""
:param name:
Name of the cell
"""
SectionCell.__init__(self, name, compile_paths=compile_paths)
self.rxds = []
def __init__(self, head: Sec, neck: Sec, cell: SectionCell, name):
"""
Wrapper for the spine which contains head and neck sections.
The connection of the head and the neck is done here in the constructor.
Parent is not defined since it is provided as a property method which looks for the parent
on the neuron's tree.
:param head:
section of the head
:param neck:
section of the neck
:param cell:
cell where those sections exists
:param name:
name of the spine
"""
cell.connect_secs(child=head,
parent=neck,
child_loc=0.0,
parent_loc=1.0)
self.head = head
self.neck = neck
self.cell = cell
SecGroup.__init__(self, secs=[head, neck], name=name)
def __init__(self, name=None, compile_paths=None):
"""
:param name:
Name of the cell
"""
SectionCell.__init__(self, name, compile_paths=compile_paths)
self.pps = []
self._pp_num = defaultdict(int)
def __init__(self, name, compile_paths=None):
SectionCell.__init__(self, name, compile_paths=compile_paths)
self._hoc_loaded = False
def __init__(self, name=None, compile_paths=None):
SectionCell.__init__(self, name, compile_paths=compile_paths)
self.spines = []
self.heads = []
self.necks = []
self._next_index = 0