def test_plot_prob_atlas(): affine = np.eye(4) shape = (6, 8, 10, 5) rng = np.random.RandomState(0) data_rng = rng.normal(size=shape) img = nibabel.Nifti1Image(data_rng, affine) # Testing the 4D plot prob atlas with contours display = plot_prob_atlas(img, view_type='contours') # Testing the 4D plot prob atlas with contours display = plot_prob_atlas(img, view_type='filled_contours', threshold=0.2) # Testing the 4D plot prob atlas with contours display = plot_prob_atlas(img, view_type='continuous')
def test_plot_prob_atlas(): affine = np.eye(4) shape = (6, 8, 10, 5) rng = np.random.RandomState(0) data_rng = rng.normal(size=shape) img = nibabel.Nifti1Image(data_rng, affine) # Testing the 4D plot prob atlas with contours display = plot_prob_atlas(img, view_type='contours') # Testing the 4D plot prob atlas with contours display = plot_prob_atlas(img, view_type='filled_contours', threshold=0.2) # Testing the 4D plot prob atlas with contours display = plot_prob_atlas(img, view_type='continuous')
def test_plot_prob_atlas(): affine = np.eye(4) shape = (6, 8, 10, 5) rng = np.random.RandomState(42) data_rng = rng.normal(size=shape) img = nibabel.Nifti1Image(data_rng, affine) # Testing the 4D plot prob atlas with contours plot_prob_atlas(img, view_type='contours') plt.close() # Testing the 4D plot prob atlas with contours plot_prob_atlas(img, view_type='filled_contours', threshold=0.2) plt.close() # Testing the 4D plot prob atlas with contours plot_prob_atlas(img, view_type='continuous') plt.close() # Testing the 4D plot prob atlas with colormap plot_prob_atlas(img, view_type='filled_contours', colorbar=True) plt.close() # threshold=None plot_prob_atlas(img, threshold=None) plt.close()