Exemple #1
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 def test_view_flexible_type(self):
     (mrec, a, b, arr) = self.data
     alttype = [('A', np.float), ('B', np.float)]
     test = mrec.view(alttype)
     self.assertTrue(isinstance(test, MaskedRecords))
     assert_equal_records(test, arr.view(alttype))
     self.assertTrue(test['B'][3] is masked)
     assert_equal(test.dtype, np.dtype(alttype))
     self.assertTrue(test._fill_value is None)
Exemple #2
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 def test_view_flexible_type(self):
     (mrec, a, b, arr) = self.data
     alttype = [('A', np.float), ('B', np.float)]
     test = mrec.view(alttype)
     assert_(isinstance(test, MaskedRecords))
     assert_equal_records(test, arr.view(alttype))
     assert_(test['B'][3] is masked)
     assert_equal(test.dtype, np.dtype(alttype))
     assert_(test._fill_value is None)
Exemple #3
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 def test_fromarrays(self):
     _a = ma.array([1, 2, 3], mask=[0, 0, 1], dtype=int)
     _b = ma.array([1.1, 2.2, 3.3], mask=[0, 0, 1], dtype=float)
     _c = ma.array(['one', 'two', 'three'], mask=[0, 0, 1], dtype='|S8')
     (mrec, nrec, _) = self.data
     for (f, l) in zip(('a', 'b', 'c'), (_a, _b, _c)):
         assert_equal(getattr(mrec, f)._mask, l._mask)
     # One record only
     _x = ma.array([1, 1.1, 'one'], mask=[1, 0, 0],)
     assert_equal_records(fromarrays(_x, dtype=mrec.dtype), mrec[0])
Exemple #4
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 def test_fromarrays(self):
     _a = ma.array([1, 2, 3], mask=[0, 0, 1], dtype=int)
     _b = ma.array([1.1, 2.2, 3.3], mask=[0, 0, 1], dtype=float)
     _c = ma.array(['one', 'two', 'three'], mask=[0, 0, 1], dtype='|S8')
     (mrec, nrec, _) = self.data
     for (f, l) in zip(('a', 'b', 'c'), (_a, _b, _c)):
         assert_equal(getattr(mrec, f)._mask, l._mask)
     # One record only
     _x = ma.array([1, 1.1, 'one'], mask=[1, 0, 0], )
     assert_equal_records(fromarrays(_x, dtype=mrec.dtype), mrec[0])
Exemple #5
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 def test_fromarrays(self):
     _a = ma.array([1, 2, 3], mask=[0, 0, 1], dtype=int)
     _b = ma.array([1.1, 2.2, 3.3], mask=[0, 0, 1], dtype=float)
     _c = ma.array(["one", "two", "three"], mask=[0, 0, 1], dtype="|S8")
     (mrec, nrec, _) = self.data
     for (f, l) in zip(("a", "b", "c"), (_a, _b, _c)):
         assert_equal(getattr(mrec, f)._mask, l._mask)
     # One record only
     _x = ma.array([1, 1.1, "one"], mask=[1, 0, 0],)
     assert_equal_records(fromarrays(_x, dtype=mrec.dtype), mrec[0])
Exemple #6
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 def test_pickling(self):
     # Test pickling
     base = self.base.copy()
     mrec = base.view(mrecarray)
     _ = pickle.dumps(mrec)
     mrec_ = pickle.loads(_)
     assert_equal(mrec_.dtype, mrec.dtype)
     assert_equal_records(mrec_._data, mrec._data)
     assert_equal(mrec_._mask, mrec._mask)
     assert_equal_records(mrec_._mask, mrec._mask)
Exemple #7
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 def test_pickling(self):
     # Test pickling
     base = self.base.copy()
     mrec = base.view(mrecarray)
     _ = pickle.dumps(mrec)
     mrec_ = pickle.loads(_)
     assert_equal(mrec_.dtype, mrec.dtype)
     assert_equal_records(mrec_._data, mrec._data)
     assert_equal(mrec_._mask, mrec._mask)
     assert_equal_records(mrec_._mask, mrec._mask)
Exemple #8
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 def test_view_flexible_type(self):
     (tarr, a, b) = self.data
     arr = tarr._series
     alttype = [('A', np.float), ('B', np.float)]
     test = tarr.view(alttype)
     self.failUnless(isinstance(test, TimeSeries))
     assert_equal_records(test, arr.view(alttype))
     self.failUnless(test['B'][3] is ma.masked)
     assert_equal(test.dtype, np.dtype(alttype))
     self.failUnless(test._fill_value is None)
 def test_view_flexible_type(self):
     (tarr, a, b) = self.data
     arr = tarr._series
     alttype = [('A', np.float), ('B', np.float)]
     test = tarr.view(alttype)
     self.failUnless(isinstance(test, TimeSeries))
     assert_equal_records(test, arr.view(alttype))
     self.failUnless(test['B'][3] is ma.masked)
     assert_equal(test.dtype, np.dtype(alttype))
     self.failUnless(test._fill_value is None)
 def test_pickling(self):
     # Test pickling
     base = self.base.copy()
     mrec = base.view(mrecarray)
     for proto in range(2, pickle.HIGHEST_PROTOCOL + 1):
         _ = pickle.dumps(mrec, protocol=proto)
         mrec_ = pickle.loads(_)
         assert_equal(mrec_.dtype, mrec.dtype)
         assert_equal_records(mrec_._data, mrec._data)
         assert_equal(mrec_._mask, mrec._mask)
         assert_equal_records(mrec_._mask, mrec._mask)
 def test_append_maskedarray(self):
     "Test appending to a MaskedTable"
     table = self.h5file.root.marray
     data = self.marray
     newdata = ma.array(zip(np.random.rand(3), np.arange(3)+10),
                        mask=[(0,0),(1,0),(0,1)],
                        dtype=data.dtype)
     table.append(newdata)
     test = table.read()
     self.failUnless(isinstance(test, MaskedArray))
     assert_equal_records(test, ma.mr_[data,newdata])
Exemple #12
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 def test_pickling(self):
     # Test pickling
     base = self.base.copy()
     mrec = base.view(mrecarray)
     for proto in range(2, pickle.HIGHEST_PROTOCOL + 1):
         _ = pickle.dumps(mrec, protocol=proto)
         mrec_ = pickle.loads(_)
         assert_equal(mrec_.dtype, mrec.dtype)
         assert_equal_records(mrec_._data, mrec._data)
         assert_equal(mrec_._mask, mrec._mask)
         assert_equal_records(mrec_._mask, mrec._mask)
 def test_append_timeseries(self):
     "Test appending to a MaskedTable"
     table = self.h5file.root.tseries
     tseries = self.tseries
     newdata = ts.time_series(zip(np.random.rand(3), np.arange(3)+10),
                        mask=[(0,0),(1,0),(0,1)],
                        dtype=tseries.dtype,
                        start_date=tseries.dates[-1]+1)
     table.append(newdata)
     test = table.read()
     self.failUnless(isinstance(test, TimeSeries))
     assert_equal_records(test, ts.concatenate((tseries,newdata)))
 def test_append_maskedarray(self):
     "Test appending to a MaskedTable"
     table = self.h5file.root.marray
     data = self.marray
     newdata = ma.array(zip(np.random.rand(3),
                            np.arange(3) + 10),
                        mask=[(0, 0), (1, 0), (0, 1)],
                        dtype=data.dtype)
     table.append(newdata)
     test = table.read()
     self.failUnless(isinstance(test, MaskedArray))
     assert_equal_records(test, ma.mr_[data, newdata])
Exemple #15
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 def test_get_dates(self):
     "Tests date retrieval"
     [d, m, mrec, dlist, dates, mts, rts] = self.data
     # Get item by dates w/ masked values
     test = rts['2007-01']
     self.failUnless(isinstance(test, ma.MaskedArray))
     self.failUnless(not isinstance(test, TimeSeries))
     assert_equal_records(test, mrec[0])
     # Get item by dates w/o masked values
     test = rts['2007-03']
     self.failUnless(isinstance(test, np.void))
     assert_equal_records(test, mrec[2])
 def test_get_dates(self):
     "Tests date retrieval"
     [d, m, mrec, dlist, dates, mts, rts] = self.data
     # Get item by dates w/ masked values
     test = rts['2007-01']
     self.failUnless(isinstance(test, ma.MaskedArray))
     self.failUnless(not isinstance(test, TimeSeries))
     assert_equal_records(test, mrec[0])
     # Get item by dates w/o masked values
     test = rts['2007-03']
     self.failUnless(isinstance(test, np.void))
     assert_equal_records(test, mrec[2])
 def test_append_timeseries(self):
     "Test appending to a MaskedTable"
     table = self.h5file.root.tseries
     tseries = self.tseries
     newdata = ts.time_series(zip(np.random.rand(3),
                                  np.arange(3) + 10),
                              mask=[(0, 0), (1, 0), (0, 1)],
                              dtype=tseries.dtype,
                              start_date=tseries.dates[-1] + 1)
     table.append(newdata)
     test = table.read()
     self.failUnless(isinstance(test, TimeSeries))
     assert_equal_records(test, ts.concatenate((tseries, newdata)))
Exemple #18
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    def test_fromrecords_wmask(self):
        # Tests construction from records w/ mask.
        (mrec, nrec, ddtype) = self.data

        _mrec = fromrecords(nrec.tolist(), dtype=ddtype, mask=[
            0,
            1,
            0,
        ])
        assert_equal_records(_mrec._data, mrec._data)
        assert_equal(_mrec._mask.tolist(), [(0, 0, 0), (1, 1, 1), (0, 0, 0)])

        _mrec = fromrecords(nrec.tolist(), dtype=ddtype, mask=True)
        assert_equal_records(_mrec._data, mrec._data)
        assert_equal(_mrec._mask.tolist(), [(1, 1, 1), (1, 1, 1), (1, 1, 1)])

        _mrec = fromrecords(nrec.tolist(), dtype=ddtype, mask=mrec._mask)
        assert_equal_records(_mrec._data, mrec._data)
        assert_equal(_mrec._mask.tolist(), mrec._mask.tolist())

        _mrec = fromrecords(nrec.tolist(),
                            dtype=ddtype,
                            mask=mrec._mask.tolist())
        assert_equal_records(_mrec._data, mrec._data)
        assert_equal(_mrec._mask.tolist(), mrec._mask.tolist())
Exemple #19
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 def test_hardmask(self):
     # Test hardmask
     base = self.base.copy()
     mbase = base.view(mrecarray)
     mbase.harden_mask()
     assert_(mbase._hardmask)
     mbase.mask = nomask
     assert_equal_records(mbase._mask, base._mask)
     mbase.soften_mask()
     assert_(not mbase._hardmask)
     mbase.mask = nomask
     # So, the mask of a field is no longer set to nomask...
     assert_equal_records(mbase._mask, ma.make_mask_none(base.shape, base.dtype))
     assert_(ma.make_mask(mbase["b"]._mask) is nomask)
     assert_equal(mbase["a"]._mask, mbase["b"]._mask)
Exemple #20
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 def test_hardmask(self):
     # Test hardmask
     base = self.base.copy()
     mbase = base.view(mrecarray)
     mbase.harden_mask()
     self.assertTrue(mbase._hardmask)
     mbase.mask = nomask
     assert_equal_records(mbase._mask, base._mask)
     mbase.soften_mask()
     self.assertTrue(not mbase._hardmask)
     mbase.mask = nomask
     # So, the mask of a field is no longer set to nomask...
     assert_equal_records(mbase._mask,
                          ma.make_mask_none(base.shape, base.dtype))
     self.assertTrue(ma.make_mask(mbase['b']._mask) is nomask)
     assert_equal(mbase['a']._mask, mbase['b']._mask)
Exemple #21
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    def test_exotic_formats(self):
        # Test that 'exotic' formats are processed properly
        easy = mrecarray(1, dtype=[("i", int), ("s", "|S8"), ("f", float)])
        easy[0] = masked
        assert_equal(easy.filled(1).item(), (1, b"1", 1.0))

        solo = mrecarray(1, dtype=[("f0", "<f8", (2, 2))])
        solo[0] = masked
        assert_equal(solo.filled(1).item(), np.array((1,), dtype=solo.dtype).item())

        mult = mrecarray(2, dtype="i4, (2,3)float, float")
        mult[0] = masked
        mult[1] = (1, 1, 1)
        mult.filled(0)
        assert_equal_records(
            mult.filled(0), np.array([(0, 0, 0), (1, 1, 1)], dtype=mult.dtype)
        )
Exemple #22
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    def test_exotic_formats(self):
        # Test that 'exotic' formats are processed properly
        easy = mrecarray(1, dtype=[('i', int), ('s', '|S8'), ('f', float)])
        easy[0] = masked
        assert_equal(easy.filled(1).item(), (1, asbytes('1'), 1.))

        solo = mrecarray(1, dtype=[('f0', '<f8', (2, 2))])
        solo[0] = masked
        assert_equal(solo.filled(1).item(),
                     np.array((1,), dtype=solo.dtype).item())

        mult = mrecarray(2, dtype="i4, (2,3)float, float")
        mult[0] = masked
        mult[1] = (1, 1, 1)
        mult.filled(0)
        assert_equal_records(mult.filled(0),
                             np.array([(0, 0, 0), (1, 1, 1)],
                                      dtype=mult.dtype))
Exemple #23
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    def test_exotic_formats(self):
        # Test that 'exotic' formats are processed properly
        easy = mrecarray(1, dtype=[('i', int), ('s', '|S8'), ('f', float)])
        easy[0] = masked
        assert_equal(easy.filled(1).item(), (1, b'1', 1.))

        solo = mrecarray(1, dtype=[('f0', '<f8', (2, 2))])
        solo[0] = masked
        assert_equal(
            solo.filled(1).item(),
            np.array((1, ), dtype=solo.dtype).item())

        mult = mrecarray(2, dtype="i4, (2,3)float, float")
        mult[0] = masked
        mult[1] = (1, 1, 1)
        mult.filled(0)
        assert_equal_records(
            mult.filled(0), np.array([(0, 0, 0), (1, 1, 1)], dtype=mult.dtype))
 def test_tabulateNV(self):
     "Tests the transformation of named variables to..."
     data5N = self.data['data5N']
     _data5N = tabulate(data5N)
     zipped5N = [((ma.filled(s['a']), ma.getmaskarray(s['a'])),
                  (ma.filled(s['b']), ma.getmaskarray(s['b'])),
                  (ma.filled(s['c']), ma.getmaskarray(s['c']))) 
                 for s in data5N]
     ndtype5N = [(fname,[('_data',ftype), ('_mask',bool)])
                 for (fname,ftype) in data5N.dtype.descr]
     data5N = np.array(zipped5N, dtype=ndtype5N)
     for key in ('a','b','c'):
         assert_equal_records(data5N[key].view(np.recarray), 
                              _data5N[key].view(np.recarray))
     #
     _data5R = tabulate(self.data['data5N'])
     data5R = np.array(zipped5N, dtype=ndtype5N)
     for key in ('a','b','c'):
         assert_equal_records(data5R[key].view(np.recarray), 
                              _data5R[key].view(np.recarray))
 def test_tabulateNV(self):
     "Tests the transformation of named variables to..."
     data5N = self.data['data5N']
     _data5N = tabulate(data5N)
     zipped5N = [((ma.filled(s['a']), ma.getmaskarray(s['a'])),
                  (ma.filled(s['b']), ma.getmaskarray(s['b'])),
                  (ma.filled(s['c']), ma.getmaskarray(s['c'])))
                 for s in data5N]
     ndtype5N = [(fname, [('_data', ftype), ('_mask', bool)])
                 for (fname, ftype) in data5N.dtype.descr]
     data5N = np.array(zipped5N, dtype=ndtype5N)
     for key in ('a', 'b', 'c'):
         assert_equal_records(data5N[key].view(np.recarray),
                              _data5N[key].view(np.recarray))
     #
     _data5R = tabulate(self.data['data5N'])
     data5R = np.array(zipped5N, dtype=ndtype5N)
     for key in ('a', 'b', 'c'):
         assert_equal_records(data5R[key].view(np.recarray),
                              _data5R[key].view(np.recarray))
Exemple #26
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 def test_get(self):
     # Tests fields retrieval
     base = self.base.copy()
     mbase = base.view(mrecarray)
     # As fields..........
     for field in ("a", "b", "c"):
         assert_equal(getattr(mbase, field), mbase[field])
         assert_equal(base[field], mbase[field])
     # as elements .......
     mbase_first = mbase[0]
     assert_(isinstance(mbase_first, mrecarray))
     assert_equal(mbase_first.dtype, mbase.dtype)
     assert_equal(mbase_first.tolist(), (1, 1.1, b"one"))
     # Used to be mask, now it's recordmask
     assert_equal(mbase_first.recordmask, nomask)
     assert_equal(mbase_first._mask.item(), (False, False, False))
     assert_equal(mbase_first["a"], mbase["a"][0])
     mbase_last = mbase[-1]
     assert_(isinstance(mbase_last, mrecarray))
     assert_equal(mbase_last.dtype, mbase.dtype)
     assert_equal(mbase_last.tolist(), (None, None, None))
     # Used to be mask, now it's recordmask
     assert_equal(mbase_last.recordmask, True)
     assert_equal(mbase_last._mask.item(), (True, True, True))
     assert_equal(mbase_last["a"], mbase["a"][-1])
     assert_((mbase_last["a"] is masked))
     # as slice ..........
     mbase_sl = mbase[:2]
     assert_(isinstance(mbase_sl, mrecarray))
     assert_equal(mbase_sl.dtype, mbase.dtype)
     # Used to be mask, now it's recordmask
     assert_equal(mbase_sl.recordmask, [0, 1])
     assert_equal_records(
         mbase_sl.mask,
         np.array(
             [(False, False, False), (True, True, True)], dtype=mbase._mask.dtype
         ),
     )
     assert_equal_records(mbase_sl, base[:2].view(mrecarray))
     for field in ("a", "b", "c"):
         assert_equal(getattr(mbase_sl, field), base[:2][field])
Exemple #27
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    def test_fromrecords(self):
        # Test construction from records.
        (mrec, nrec, ddtype) = self.data
        #......
        palist = [(1, 'abc', 3.7000002861022949, 0),
                  (2, 'xy', 6.6999998092651367, 1),
                  (0, ' ', 0.40000000596046448, 0)]
        pa = recfromrecords(palist, names='c1, c2, c3, c4')
        mpa = fromrecords(palist, names='c1, c2, c3, c4')
        assert_equal_records(pa, mpa)
        #.....
        _mrec = fromrecords(nrec)
        assert_equal(_mrec.dtype, mrec.dtype)
        for field in _mrec.dtype.names:
            assert_equal(getattr(_mrec, field), getattr(mrec._data, field))

        _mrec = fromrecords(nrec.tolist(), names='c1,c2,c3')
        assert_equal(_mrec.dtype, [('c1', int), ('c2', float), ('c3', '|S5')])
        for (f, n) in zip(('c1', 'c2', 'c3'), ('a', 'b', 'c')):
            assert_equal(getattr(_mrec, f), getattr(mrec._data, n))

        _mrec = fromrecords(mrec)
        assert_equal(_mrec.dtype, mrec.dtype)
        assert_equal_records(_mrec._data, mrec.filled())
        assert_equal_records(_mrec._mask, mrec._mask)
Exemple #28
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    def test_fromrecords(self):
        # Test construction from records.
        (mrec, nrec, ddtype) = self.data
        #......
        palist = [(1, 'abc', 3.7000002861022949, 0),
                  (2, 'xy', 6.6999998092651367, 1),
                  (0, ' ', 0.40000000596046448, 0)]
        pa = recfromrecords(palist, names='c1, c2, c3, c4')
        mpa = fromrecords(palist, names='c1, c2, c3, c4')
        assert_equal_records(pa, mpa)
        #.....
        _mrec = fromrecords(nrec)
        assert_equal(_mrec.dtype, mrec.dtype)
        for field in _mrec.dtype.names:
            assert_equal(getattr(_mrec, field), getattr(mrec._data, field))

        _mrec = fromrecords(nrec.tolist(), names='c1,c2,c3')
        assert_equal(_mrec.dtype, [('c1', int), ('c2', float), ('c3', '|S5')])
        for (f, n) in zip(('c1', 'c2', 'c3'), ('a', 'b', 'c')):
            assert_equal(getattr(_mrec, f), getattr(mrec._data, n))

        _mrec = fromrecords(mrec)
        assert_equal(_mrec.dtype, mrec.dtype)
        assert_equal_records(_mrec._data, mrec.filled())
        assert_equal_records(_mrec._mask, mrec._mask)
Exemple #29
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    def test_fromrecords(self):
        # Test construction from records.
        (mrec, nrec, ddtype) = self.data
        # ......
        palist = [
            (1, "abc", 3.7000002861022949, 0),
            (2, "xy", 6.6999998092651367, 1),
            (0, " ", 0.40000000596046448, 0),
        ]
        pa = recfromrecords(palist, names="c1, c2, c3, c4")
        mpa = fromrecords(palist, names="c1, c2, c3, c4")
        assert_equal_records(pa, mpa)
        # .....
        _mrec = fromrecords(nrec)
        assert_equal(_mrec.dtype, mrec.dtype)
        for field in _mrec.dtype.names:
            assert_equal(getattr(_mrec, field), getattr(mrec._data, field))

        _mrec = fromrecords(nrec.tolist(), names="c1,c2,c3")
        assert_equal(_mrec.dtype, [("c1", int), ("c2", float), ("c3", "|S5")])
        for (f, n) in zip(("c1", "c2", "c3"), ("a", "b", "c")):
            assert_equal(getattr(_mrec, f), getattr(mrec._data, n))

        _mrec = fromrecords(mrec)
        assert_equal(_mrec.dtype, mrec.dtype)
        assert_equal_records(_mrec._data, mrec.filled())
        assert_equal_records(_mrec._mask, mrec._mask)
Exemple #30
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 def test_get(self):
     # Tests fields retrieval
     base = self.base.copy()
     mbase = base.view(mrecarray)
     # As fields..........
     for field in ('a', 'b', 'c'):
         assert_equal(getattr(mbase, field), mbase[field])
         assert_equal(base[field], mbase[field])
     # as elements .......
     mbase_first = mbase[0]
     assert_(isinstance(mbase_first, mrecarray))
     assert_equal(mbase_first.dtype, mbase.dtype)
     assert_equal(mbase_first.tolist(), (1, 1.1, asbytes('one')))
     # Used to be mask, now it's recordmask
     assert_equal(mbase_first.recordmask, nomask)
     assert_equal(mbase_first._mask.item(), (False, False, False))
     assert_equal(mbase_first['a'], mbase['a'][0])
     mbase_last = mbase[-1]
     assert_(isinstance(mbase_last, mrecarray))
     assert_equal(mbase_last.dtype, mbase.dtype)
     assert_equal(mbase_last.tolist(), (None, None, None))
     # Used to be mask, now it's recordmask
     assert_equal(mbase_last.recordmask, True)
     assert_equal(mbase_last._mask.item(), (True, True, True))
     assert_equal(mbase_last['a'], mbase['a'][-1])
     assert_((mbase_last['a'] is masked))
     # as slice ..........
     mbase_sl = mbase[:2]
     assert_(isinstance(mbase_sl, mrecarray))
     assert_equal(mbase_sl.dtype, mbase.dtype)
     # Used to be mask, now it's recordmask
     assert_equal(mbase_sl.recordmask, [0, 1])
     assert_equal_records(mbase_sl.mask,
                          np.array([(False, False, False),
                                    (True, True, True)],
                                   dtype=mbase._mask.dtype))
     assert_equal_records(mbase_sl, base[:2].view(mrecarray))
     for field in ('a', 'b', 'c'):
         assert_equal(getattr(mbase_sl, field), base[:2][field])
 def test_tseries_read(self):
     "Test reading specific elements of a TimeSeriesTable"
     table = self.h5file.root.tseries
     series = self.tseries
     #
     test = table.read()
     self.failUnless(isinstance(test, TimeSeries))
     assert_equal_records(test, series)
     #
     test = table.read(field='a')
     self.failUnless(isinstance(test, TimeSeries))
     assert_equal(test, series['a'])
     #
     test = table.read(step=2)
     self.failUnless(isinstance(test, TimeSeries))
     assert_equal(test, series[::2])
     #
     test = table.readCoordinates([1, 2, 3])
     self.failUnless(isinstance(test, TimeSeries))
     assert_equal(test, series[[1, 2, 3]])
     #
     test = table.readCoordinates([1, 2, 3], field='a')
     self.failUnless(isinstance(test, TimeSeries))
     assert_equal(test, series['a'][[1, 2, 3]])
 def test_marray_read(self):
     "Test reading specific elements of a MaskedTable"
     table = self.h5file.root.marray
     data = self.marray
     #
     test = table.read()
     self.failUnless(isinstance(test, MaskedArray))
     assert_equal_records(test, data)
     #
     test = table.read(field='a')
     self.failUnless(isinstance(test, MaskedArray))
     assert_equal(test, data['a'])
     #
     test = table.read(step=2)
     self.failUnless(isinstance(test, MaskedArray))
     assert_equal(test, data[::2])
     #
     test = table.readCoordinates([1, 2, 3])
     self.failUnless(isinstance(test, MaskedArray))
     assert_equal(test, data[[1, 2, 3]])
     #
     test = table.readCoordinates([1, 2, 3], field='a')
     self.failUnless(isinstance(test, MaskedArray))
     assert_equal(test, data['a'][[1, 2, 3]])
 def test_tseries_read(self):
     "Test reading specific elements of a TimeSeriesTable"
     table = self.h5file.root.tseries
     series = self.tseries
     #
     test = table.read()
     self.failUnless(isinstance(test, TimeSeries))
     assert_equal_records(test, series)
     #
     test = table.read(field='a')
     self.failUnless(isinstance(test, TimeSeries))
     assert_equal(test, series['a'])
     #
     test = table.read(step=2)
     self.failUnless(isinstance(test, TimeSeries))
     assert_equal(test, series[::2])
     #
     test = table.readCoordinates([1,2,3])
     self.failUnless(isinstance(test, TimeSeries))
     assert_equal(test, series[[1,2,3]])
     #
     test = table.readCoordinates([1,2,3], field='a')
     self.failUnless(isinstance(test, TimeSeries))
     assert_equal(test, series['a'][[1,2,3]])
 def test_marray_read(self):
     "Test reading specific elements of a MaskedTable"
     table = self.h5file.root.marray
     data = self.marray
     #
     test = table.read()
     self.failUnless(isinstance(test, MaskedArray))
     assert_equal_records(test, data)
     #
     test = table.read(field='a')
     self.failUnless(isinstance(test, MaskedArray))
     assert_equal(test, data['a'])
     #
     test = table.read(step=2)
     self.failUnless(isinstance(test, MaskedArray))
     assert_equal(test, data[::2])
     #
     test = table.readCoordinates([1,2,3])
     self.failUnless(isinstance(test, MaskedArray))
     assert_equal(test, data[[1,2,3]])
     #
     test = table.readCoordinates([1,2,3], field='a')
     self.failUnless(isinstance(test, MaskedArray))
     assert_equal(test, data['a'][[1,2,3]])
Exemple #35
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 def test_byview(self):
     # Test creation by view
     base = self.base
     mbase = base.view(mrecarray)
     assert_equal(mbase.recordmask, base.recordmask)
     assert_equal_records(mbase._mask, base._mask)
     assert_(isinstance(mbase._data, recarray))
     assert_equal_records(mbase._data, base._data.view(recarray))
     for field in ('a', 'b', 'c'):
         assert_equal(base[field], mbase[field])
     assert_equal_records(mbase.view(mrecarray), mbase)
Exemple #36
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 def test_byview(self):
     # Test creation by view
     base = self.base
     mbase = base.view(mrecarray)
     assert_equal(mbase.recordmask, base.recordmask)
     assert_equal_records(mbase._mask, base._mask)
     assert_(isinstance(mbase._data, recarray))
     assert_equal_records(mbase._data, base._data.view(recarray))
     for field in ('a', 'b', 'c'):
         assert_equal(base[field], mbase[field])
     assert_equal_records(mbase.view(mrecarray), mbase)
Exemple #37
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 def test_get_index(self):
     "Tests index retrieval"
     [d, m, mrec, dlist, dates, mts, rts] = self.data
     test = rts[0]
     self.failUnless(not (isinstance(test, TimeSeriesRecords)))
     assert_equal_records(test, rts._data[0])
     assert_equal_records(test, mrec._data[0])
     # We can't use assert_equal here, as it tries to convert the tuple into a singleton
     #        self.failUnless(rts[0]._data.view(numpyndarray) == mrec[0])
     assert_equal_records(rts._data[0], mrec[0])
     assert_equal(rts.mask[0], mrec.mask[0])
     assert_equal(test.mask, rts.mask[0])
    def test_get_index(self):
        "Tests index retrieval"
        [d, m, mrec, dlist, dates, mts, rts] = self.data
        test = rts[0]
        self.failUnless(not (isinstance(test, TimeSeriesRecords)))
        assert_equal_records(test, rts._data[0])
        assert_equal_records(test, mrec._data[0])
        # We can't use assert_equal here, as it tries to convert the tuple into a singleton
#        self.failUnless(rts[0]._data.view(numpyndarray) == mrec[0])
        assert_equal_records(rts._data[0], mrec[0])
        assert_equal(rts.mask[0], mrec.mask[0])
        assert_equal(test.mask, rts.mask[0])
Exemple #39
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    def test_fromrecords_wmask(self):
        # Tests construction from records w/ mask.
        (mrec, nrec, ddtype) = self.data

        _mrec = fromrecords(nrec.tolist(), dtype=ddtype, mask=[0, 1, 0,])
        assert_equal_records(_mrec._data, mrec._data)
        assert_equal(_mrec._mask.tolist(), [(0, 0, 0), (1, 1, 1), (0, 0, 0)])

        _mrec = fromrecords(nrec.tolist(), dtype=ddtype, mask=True)
        assert_equal_records(_mrec._data, mrec._data)
        assert_equal(_mrec._mask.tolist(), [(1, 1, 1), (1, 1, 1), (1, 1, 1)])

        _mrec = fromrecords(nrec.tolist(), dtype=ddtype, mask=mrec._mask)
        assert_equal_records(_mrec._data, mrec._data)
        assert_equal(_mrec._mask.tolist(), mrec._mask.tolist())

        _mrec = fromrecords(nrec.tolist(), dtype=ddtype,
                            mask=mrec._mask.tolist())
        assert_equal_records(_mrec._data, mrec._data)
        assert_equal(_mrec._mask.tolist(), mrec._mask.tolist())
Exemple #40
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 def test_view_by_itself(self):
     (tarr, a, b) = self.data
     test = tarr.view()
     self.failUnless(isinstance(test, TimeSeries))
     assert_equal_records(test, tarr)
     assert_equal_records(test._mask, tarr._mask)
 def test_view_by_itself(self):
     (tarr, a, b) = self.data
     test = tarr.view()
     self.failUnless(isinstance(test, TimeSeries))
     assert_equal_records(test, tarr)
     assert_equal_records(test._mask, tarr._mask)
Exemple #42
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 def test_view_by_itself(self):
     (mrec, a, b, arr) = self.data
     test = mrec.view()
     self.assertTrue(isinstance(test, MaskedRecords))
     assert_equal_records(test, mrec)
     assert_equal_records(test._mask, mrec._mask)
Exemple #43
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 def test_view_by_itself(self):
     (mrec, a, b, arr) = self.data
     test = mrec.view()
     assert_(isinstance(test, MaskedRecords))
     assert_equal_records(test, mrec)
     assert_equal_records(test._mask, mrec._mask)