def raw_data(request):
form = DataRequestForm()
if request.method == 'POST':
form = DataRequestForm(request.POST)
if form.is_valid():
seqid_input = form.cleaned_data.get('seqids')
seqids = seqid_input.split()
data_request = DataRequest.objects.create(seqids=seqids,
user=request.user)
data_request.status = 'Processing'
data_request.request_type = 'FASTQ'
data_request.save()
get_raw_data(data_request_pk=data_request.pk)
return redirect('data:data_download',
data_request_pk=data_request.pk)
return render(request, 'data/raw_data.html', {'form': form})
def assembled_data(request):
form = DataRequestForm()
if request.method == 'POST':
form = DataRequestForm(request.POST)
if form.is_valid():
seqid_input = form.cleaned_data.get('seqids')
seqids = seqid_input.split()
data_request = DataRequest.objects.create(seqids=seqids,
user=request.user)
data_request.status = 'Processing'
data_request.request_type = 'FASTA'
data_request.save()
get_assembled_data.apply_async(queue='default',
args=(data_request.pk, ),
countdown=10)
return redirect('data:data_download',
data_request_pk=data_request.pk)
return render(request, 'data/assembled_data.html', {'form': form})
def test_invalid_form_seqid_does_not_exist(self):
form = DataRequestForm({'seqids': '2015-SEQ-0711 2020-SEQ-0712'})
self.assertFalse(form.is_valid())
def test_invalid_form_wrong_regex(self):
form = DataRequestForm({'seqids': '2015-SEQ-0711 2015-SEQ-07124'})
self.assertFalse(form.is_valid())
def test_valid_form(self):
form = DataRequestForm({'seqids': '2015-SEQ-0711 2015-SEQ-0712'})
self.assertTrue(form.is_valid())