def test_score():
"""MotifMatchResult scoring"""
m = Motif(polymorphisms=(p1,))
mmo = MotifMatchObject(m, match=1)
mq = MotifQuery(all_polymorphisms=(p1,p2),
defining_polymorphisms=(p1,))
mmr = MotifMatchResult(mq, [mmo])
mmr.score()
def test_filter_by():
"""MotifMatchResult filter_by"""
m1 = Motif(polymorphisms=(p1,), sources=['a', 'b'])
mmo1 = MotifMatchObject(m1, match=1, missing=1)
m2 = Motif(polymorphisms=(p3,), sources=['a'])
mmo2 = MotifMatchObject(m2, mismatch=1)
m3 = Motif(polymorphisms=(p1,p2), sources=['b'])
mmo3 = MotifMatchObject(m3, match=2)
mq = MotifQuery(all_polymorphisms=(p1,p2),
defining_polymorphisms=(p1,p2))
mmr = MotifMatchResult(mq, [mmo1, mmo2, mmo3])
assert_equal(14, mmr.top_score)
mmr.filter_by(source='a')
assert_equal(1, mmr.top_score)
mmr.reset_filter()
assert_equal(14, mmr.top_score)
mmr.filter_by(sources_in=['a'])
assert_equal(1, mmr.top_score)
mmr.reset_filter()
assert_equal(14, mmr.top_score)
