def generate_lesions_with_surfaces(nb_lesions = 100, surface_inc = 0.1, surface_chlo = 0.2,
surface_nec = 0.3, surface_spo = 0.4):
def necrotic_area_new(lesion):
return lesion.surface_nec + lesion.surface_spo
diseases=plugin.discover('alep.disease')
septoria = diseases['septoria_exchanging_rings'].load()
LesionKlass = septoria.lesion()
LesionKlass.necrotic_area = necrotic_area_new
lesion_stock = [LesionKlass(nb_spores=1) for i in range(nb_lesions)]
for lesion in lesion_stock:
lesion.surface_alive = surface_inc + surface_chlo + surface_nec + surface_spo
lesion.surface_inc = surface_inc
lesion.surface_chlo = surface_chlo
lesion.surface_nec = surface_nec
lesion.surface_spo = surface_spo
return lesion_stock
def generate_lesions_with_surfaces(nb_lesions=100,
surface_inc=0.1,
surface_chlo=0.2,
surface_nec=0.3,
surface_spo=0.4):
def necrotic_area_new(lesion):
return lesion.surface_nec + lesion.surface_spo
diseases = plugin.discover('alep.disease')
septoria = diseases['septoria_exchanging_rings'].load()
LesionKlass = septoria.lesion()
LesionKlass.necrotic_area = necrotic_area_new
lesion_stock = [LesionKlass(nb_spores=1) for i in range(nb_lesions)]
for lesion in lesion_stock:
lesion.surface_alive = surface_inc + surface_chlo + surface_nec + surface_spo
lesion.surface_inc = surface_inc
lesion.surface_chlo = surface_chlo
lesion.surface_nec = surface_nec
lesion.surface_spo = surface_spo
return lesion_stock
def test2():
plugins = plugin.discover('wralea')
myentrypoint = plugins['oalab']
myplugin = plugin.Plugin(myentrypoint)
assert myplugin.name == myentrypoint.name
def test1():
plugins = plugin.discover('wralea')
assert 'oalab' in plugins
def test2():
plugins = plugin.discover('wralea')
myentrypoint = plugins['oalab']
myplugin = plugin.Plugin(myentrypoint)
assert myplugin.name == myentrypoint.name
def test1():
plugins = plugin.discover('wralea')
assert 'oalab' in plugins
def test_brown_rust_plugin():
diseases = plugin.discover('alep.disease')
brown_rust = diseases['brown_rust'].load()
assert issubclass(BrownRustFungus, Fungus)
assert brown_rust == BrownRustFungus
