Exemple #1
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class LoadJSON(index_util.LoadJSONBase):
    index_name = 'animalandveterinarydrugevent'
    mapping_file = './schemas/animalandveterinarydrugevent_mapping.json'
    data_source = XML2JSON()
    use_checksum = False
    optimize_index = True
    last_update_date = lambda _: newest_file_timestamp(ADAE_LOCAL_DIR)
Exemple #2
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class LoadJSON(index_util.LoadJSONBase):
  index_name = 'tobaccoproblem'
  mapping_file = './schemas/tobaccoproblem_mapping.json'
  data_source = TobaccoProblem2JSON()
  use_checksum = False
  optimize_index = True
  last_update_date = lambda _: newest_file_timestamp(TOBACCO_RAW_DIR)
Exemple #3
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class LoadJSON(index_util.LoadJSONBase):
    index_name = 'othernsde'
    mapping_file = './schemas/othernsde_mapping.json'
    data_source = NSDE2JSON()
    use_checksum = False
    optimize_index = True
    last_update_date = lambda _: newest_file_timestamp(NSDE_RAW_DIR)
Exemple #4
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class LoadJSON(index_util.LoadJSONBase):
    index_name = 'devicereglist'
    mapping_file = './schemas/registration_mapping.json'
    data_source = AnnotateDevice()
    use_checksum = False
    optimize_index = True
    last_update_date = lambda _: newest_file_timestamp(RAW_DIR)
Exemple #5
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class LoadJSON(index_util.LoadJSONBase):
    index_name = 'foodevent'
    mapping_file = './schemas/foodevent_mapping.json'
    data_source = CSV2JSON()
    use_checksum = False
    optimize_index = True
    last_update_date = lambda _: newest_file_timestamp(DOWNLOAD_DIR)
Exemple #6
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class LoadJSON(index_util.LoadJSONBase):
  index_name = 'ndc'
  mapping_file = './schemas/ndc_mapping.json'
  data_source = AnnotateJSON()
  use_checksum = False
  optimize_index = True
  last_update_date = lambda _: newest_file_timestamp(RAW_DIR)
Exemple #7
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class LoadJSONByRunDate(index_util.LoadJSONBase):
    run_date = luigi.Parameter()
    index_name = 'deviceevent'
    mapping_file = 'schemas/maude_mapping.json'
    optimize_index = False
    docid_key = 'mdr_report_key'
    use_checksum = True
    last_update_date = lambda _: newest_file_timestamp(RAW_DIR)

    def _data(self):
        return AnnotateReport(run_date=self.run_date)
Exemple #8
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class LoadJSONQuarter(index_util.LoadJSONBase):
    quarter = luigi.Parameter()
    index_name = 'drugevent'
    mapping_file = './schemas/faers_mapping.json'
    docid_key = '@case_number'
    use_checksum = True
    last_update_date = lambda _: newest_file_timestamp(RAW_DIR)

    # Optimize after all quarters are finished.
    optimize_index = False

    def _data(self):
        return AnnotateJSON(self.quarter)