def test_read_obspack_flask_2021():
'''Test inputs from "obspack_multi-species_1_CCGGSurfaceFlask_v2.0_2021-02-09"'''
filepath = get_datapath(filename="ch4_spf_surface-flask_1_ccgg_Event.nc",
data_type="NOAA")
data = parse_noaa(data_filepath=filepath,
site="SPF",
inlet="flask",
measurement_type="flask",
network="NOAA")
ch4_data = data["ch4"]["data"]
assert ch4_data.time[0] == Timestamp("1995-01-28T19:20:00")
assert ch4_data.time[-1] == Timestamp("2015-12-12T20:15:00")
assert ch4_data["ch4"][0] == pytest.approx(1673.89)
assert ch4_data["ch4"][-1] == pytest.approx(1785.86)
assert ch4_data["ch4_variability"][0] == pytest.approx(2.71)
assert ch4_data["ch4_variability"][-1] == pytest.approx(0.91)
attributes = ch4_data.attrs
assert "sampling_period" in attributes
assert attributes["sampling_period"] == "NOT_SET"
assert "sampling_period_estimate" in attributes
assert float(attributes["sampling_period_estimate"]) > 0.0
ch4_metadata = data["ch4"]["metadata"]
assert "sampling_period" in ch4_metadata
assert "sampling_period_estimate" in ch4_metadata
parsed_surface_metachecker(data=data)
def test_read_obspack_2020():
'''Test inputs from "obspack_ch4_1_GLOBALVIEWplus_v2.0_2020-04-24"'''
filepath = get_datapath(
filename="ch4_esp_surface-flask_2_representative.nc", data_type="NOAA")
data = parse_noaa(data_filepath=filepath,
site="esp",
inlet="flask",
measurement_type="flask",
network="NOAA")
ch4_data = data["ch4"]["data"]
assert ch4_data.time[0] == Timestamp("1993-06-17T00:12:30")
assert ch4_data.time[-1] == Timestamp("2002-01-12T12:00:00")
assert ch4_data["ch4"][0] == pytest.approx(1.76763e-06)
assert ch4_data["ch4"][-1] == pytest.approx(1.848995e-06)
assert ch4_data["ch4_number_of_observations"][0] == 2.0
assert ch4_data["ch4_number_of_observations"][-1] == 2.0
assert ch4_data["ch4_variability"][0] == pytest.approx(1.668772e-09)
assert ch4_data["ch4_variability"][-1] == pytest.approx(1.5202796e-09)
# Check added attributes around sampling period
attributes = ch4_data.attrs
assert "sampling_period" in attributes
assert attributes["sampling_period"] == "NOT_SET"
assert "sampling_period_estimate" in attributes
ch4_metadata = data["ch4"]["metadata"]
assert "sampling_period" in ch4_metadata
assert "sampling_period_estimate" in ch4_metadata
def test_read_raw_file():
filepath = get_datapath(
filename="co_pocn25_surface-flask_1_ccgg_event.txt", data_type="NOAA")
data = parse_noaa(data_filepath=filepath,
inlet="flask",
site="pocn25",
measurement_type="flask",
sampling_period=1200)
parsed_surface_metachecker(data=data)
co_data = data["co"]["data"]
assert co_data.time[0] == Timestamp("1990-06-29T05:00:00")
assert co_data["co"][0] == pytest.approx(94.9)
assert co_data["co_repeatability"][0] == pytest.approx(-999.99)
assert co_data["co_selection_flag"][0] == 0
assert co_data.time[-1] == Timestamp("2017-07-15T04:15:00")
assert co_data["co"][-1] == pytest.approx(73.16)
assert co_data["co_repeatability"][-1] == pytest.approx(-999.99)
assert co_data["co_selection_flag"][-1] == 0
attrs = co_data.attrs
assert attributes_checker_obssurface(attrs=attrs, species="co")
def test_read_incorrect_site_raises():
filepath = get_datapath(
filename="ch4_UNKOWN_surface-flask_1_ccgg_event.txt", data_type="NOAA")
with pytest.raises(ValueError):
data = parse_noaa(data_filepath=filepath,
site="NotASite",
inlet="flask",
measurement_type="flask")
def scsn06_data():
filepath = get_datapath(
filename="ch4_scsn06_surface-flask_1_ccgg_event.txt", data_type="NOAA")
data = parse_noaa(data_filepath=filepath,
site="scsn06",
inlet="flask",
measurement_type="flask",
sampling_period="1200")
return data