diameter=5.2, # diameter (mm) of each well on the plate
depth=18.6, # depth (mm) of each well on the plate
volume=1000)
plate_name = 'One-Column-reservoir'
if plate_name not in labware.list():
custom_plate = labware.create(
plate_name, # name of you labware
grid=(1, 1), # specify amount of (columns, rows)
spacing=(0, 0), # distances (mm) between each (column, row)
diameter=81, # diameter (mm) of each well on the plate
depth=35, # depth (mm) of each well on the plate
volume=350000)
#### LABWARE SETUP ####
temp_deck_1 = tempdeck.TempDeck()
temp_deck_2 = tempdeck.TempDeck()
temp_deck_1._port = '/dev/ttyACM0'
temp_deck_2._port = '/dev/ttyACM1'
if not robot.is_simulating():
temp_deck_1.connect()
temp_deck_2.connect()
temp_deck1 = modules.load('tempdeck', '4')
Cold_plate = labware.load('biorad-hardshell-96-PCR', '4', share=True)
# trough = labware.load('trough-12row', '2')
# Trash = labware.load('One-Column-reservoir','3')
temp_deck2 = modules.load('tempdeck', '10')
temp_plate = labware.load('1ml_Covaris', '10', share=True)
#Then replace the below serial number with their corresponding numbers
cold_deck_ID = "TDV04P20190129B13"
hot_deck_ID = "TDV04P20190129B19"
mag_deck_ID = "MDV01P20181127A24"
module_dict = dict()
# Scan /dev/attyACM* for all dev paths:
devs = glob.glob("/dev/ttyACM*")
# Scan all ACM dev paths and attempt to connect temp modules
temp_decks = []
for dev in devs:
deck = tempdeck.TempDeck()
deck._port = dev
# I did not test this try block. Depending on how the code is written, it may not throw an error when you attempt to connect to a mag deck. If that's the case, you may consider calling sys command `udevadm info` to get name of module and only connect when name is tempdeck
try:
deck.connect()
except:
continue
temp_decks.append(deck)
# If you have more than one mag deck, you need to do the same here as well
# If modules not found. Give error and exit
if len(temp_decks) == 0:
print("Failed to find given modules. Are they plugged in?")
exit(1)