#This doesn't work as an empty organism
#gripa = Organism(' ','',' ')
#Full organism
covid10 = Organism('NC_12345.0', 12, 'AGSUJDJGGAS',
'Description of an organism')
#Can't be half full
#covid10 = Organism(None, 'AGUHSHDS', 'Description')
"""Create organism from file FASTA"""
# 1) Create an empty Organism
covid2 = Organism()
# 2) Use createByFasta
covid2.createByFASTA('./samples/sequence2.fasta')
# The path is relative to the directory in which it is run
# the program or can be an absolute path
# 3) Ready for instructions
covid2.printOrganism()
"""Export an organism to FASTA file"""
covid2.exportToFASTA()
"""Create organism from file JSON"""
# 1) Create an empty Organism
covid3 = Organism()
# 2) Use createByJSON
covid3.createByJSON('./samples/sequence1.json', 'organism', 'nc', 'sequence',
'description')
