def main():
global_init('curae_domo')
p = Patients()
p.name = "Karl"
p.address = "Berlin"
p.phone = "00000000"
p.care_level = "high"
p.caretaker = "Alex"
p.save()
def test_unique_genes_of_wilms(self):
possible_values = Patients().get_values_of_multiple_criteria(
criteria=[{
'cancer_type': 'Wilms tumor'
}, {
'gene': ''
}])
self.assertEqual(3, len(possible_values)) # ['CTNNB1', 'REST', 'PAX6']
def test_unique_significance_multiple_criteria(self):
possible_values = Patients().get_values_of_multiple_criteria(
criteria=[{
'gene': 'CTNNB1'
}, {
'significance': ''
}])
self.assertEqual(2, len(possible_values)) # ['pathogenic',
def test_two_criteria_and(self):
patients_two_criteria = Patients().get_by_multiple_criteria(
criteria=[{
'gender': 'male'
}, {
'age': 30
}], syntax='AND')
self.assertEqual(2, len(patients_two_criteria))
def test_three_criteria_and(self):
patients_three_criteria = Patients().get_by_multiple_criteria(
criteria=[{
'gender': 'male'
}, {
'age': 30
}, {
'variant_type': 'SNV'
}],
syntax='AND')
self.assertEqual(1, len(patients_three_criteria))
def package_count(cls):
return Patients.objects().count()
def popular_packages(cls, limit: int) -> List[Patients]:
packages = Patients.objects()\
.order_by('name')\
.limit(limit)
return list(packages)
def find_package_by_name(cls, name):
package = Patients.objects(name=name).first()
return package
def __init__(self):
#also adding dummy data
doctor = Doctor("Turnip Cow", "christine lu", "nina chen")
patient1 = Patients("Nina Chen", "Male", "*****@*****.**", "SWAG")
patient2 = Patients("Christine Lu", "Female", "*****@*****.**",
"COOL")
patient1.add_medication("Weed")
patient1.add_task("Run 100km")
patient2.add_medication("Cigs")
patient2.add_task("Run 100km")
patient1.add_appointment(
Appointment("05/05/2020", "panadol", "just a mild fever"))
doctor.add_patients(patient1)
doctor.add_patients(patient2)
self.users = [doctor]
def test_all_unique_significance(self):
possible_values = Patients().get_values_of_criterion(
criterion={'significance': ''})
self.assertEqual(5, len(possible_values)) # ['pathogenic',
def test_all_unique_genes(self):
possible_values = Patients().get_values_of_criterion(
criterion={'gene': ''})
self.assertEqual(8, len(possible_values)) # ['CTNNB1', 'REST', 'PAX6',
def test_patient_age_number(self):
patient_30_years = Patients().get_by_criterion(criterion={'age': 30})
self.assertEqual(3, len(patient_30_years))
def test_patient_male_number(self):
males = Patients().get_by_criterion(criterion={'gender': 'male'})
self.assertEqual(6, len(males))
def test_patient_female_number(self):
females = Patients().get_by_criterion(criterion={'gender': 'female'})
self.assertEqual(4, len(females))
def test_patient_ids(self):
patients = Patients().get_all_data()
ids = [patient['id'] for patient in patients]
self.assertEqual(list(range(10)), ids)
def test_number_of_patients(self):
patients = Patients().get_all_data()
self.assertEqual(len(patients), 10)