def _update_analysis_reports_and_datastore(tnode_, task_):
assert (len(tnode_.meta_task.output_file_display_names) ==
len(tnode_.meta_task.output_file_descriptions) ==
len(tnode_.meta_task.output_types) == len(task_.output_files))
for i_file, (file_type_, path_, name, description) in enumerate(zip(
tnode_.meta_task.output_types, task_.output_files,
tnode_.meta_task.output_file_display_names,
tnode_.meta_task.output_file_descriptions)):
source_id = "{t}-out-{i}".format(t=task_.task_id, i=i_file)
if tnode_.meta_task.datastore_source_id is not None:
source_id = tnode_.meta_task.datastore_source_id
ds_uuid = _get_or_create_uuid_from_file(path_, file_type_)
is_chunked_ = _is_chunked_task_node_type(tnode_)
ds_file_ = DataStoreFile(ds_uuid, source_id, file_type_.file_type_id, path_, is_chunked=is_chunked_, name=name, description=description)
ds.add(ds_file_)
ds.write_update_json(job_resources.datastore_json)
# Update Services
services_add_datastore_file(ds_file_)
dsr = DU.datastore_to_report(ds)
R.write_report_to_html(dsr, os.path.join(job_resources.html, 'datastore.html'))
if file_type_ == FileTypes.REPORT:
T.write_task_report(job_resources, task_.task_id, path_, DU._get_images_in_dir(task_.output_dir))
update_analysis_file_links(tnode_.idx, path_)
def _update_analysis_reports_and_datastore(tnode_, task_):
assert (len(tnode_.meta_task.output_file_display_names) ==
len(tnode_.meta_task.output_file_descriptions) ==
len(tnode_.meta_task.output_types) == len(task_.output_files))
for i_file, (file_type_, path_, name, description) in enumerate(zip(
tnode_.meta_task.output_types, task_.output_files,
tnode_.meta_task.output_file_display_names,
tnode_.meta_task.output_file_descriptions)):
source_id = "{t}-out-{i}".format(t=task_.task_id, i=i_file)
if tnode_.meta_task.datastore_source_id is not None:
source_id = tnode_.meta_task.datastore_source_id
ds_uuid = _get_or_create_uuid_from_file(path_, file_type_)
is_chunked_ = _is_chunked_task_node_type(tnode_)
ds_file_ = DataStoreFile(ds_uuid, source_id, file_type_.file_type_id, path_, is_chunked=is_chunked_, name=name, description=description)
ds.add(ds_file_)
ds.write_update_json(job_resources.datastore_json)
# Update Services
services_add_datastore_file(ds_file_)
dsr = DU.datastore_to_report(ds)
R.write_report_to_html(dsr, os.path.join(job_resources.html, 'datastore.html'))
if file_type_ == FileTypes.REPORT:
T.write_task_report(job_resources, task_.task_id, path_, DU._get_images_in_dir(task_.output_dir))
update_analysis_file_links(tnode_.idx, path_)
def _update_analysis_reports_and_datastore(tnode_, task_):
for file_type_, path_ in zip(tnode_.meta_task.output_types, task_.output_files):
source_id = "{t}-{f}".format(t=task_.task_id, f=file_type_.file_type_id)
ds_uuid = _get_dataset_uuid_or_create_uuid(path_)
ds_file_ = DataStoreFile(ds_uuid, source_id, file_type_.file_type_id, path_)
ds.add(ds_file_)
ds.write_update_json(job_resources.datastore_json)
# Update Services
services_add_datastore_file(ds_file_)
dsr = DU.datastore_to_report(ds)
R.write_report_to_html(dsr, os.path.join(job_resources.html, 'datastore.html'))
if file_type_ == FileTypes.REPORT:
T.write_task_report(job_resources, task_.task_id, path_, DU._get_images_in_dir(task_.output_dir))
update_analysis_file_links(tnode_.idx, path_)
def _update_analysis_reports_and_datastore(tnode_, task_):
for file_type_, path_ in zip(tnode_.meta_task.output_types, task_.output_files):
source_id = "{t}-{f}".format(t=task_.task_id, f=file_type_.file_type_id)
ds_uuid = _get_dataset_uuid_or_create_uuid(path_)
ds_file_ = DataStoreFile(ds_uuid, source_id, file_type_.file_type_id, path_)
ds.add(ds_file_)
ds.write_update_json(job_resources.datastore_json)
# Update Services
services_add_datastore_file(ds_file_)
dsr = DU.datastore_to_report(ds)
R.write_report_to_html(dsr, os.path.join(job_resources.html, 'datastore.html'))
if file_type_ == FileTypes.REPORT:
T.write_task_report(job_resources, task_.task_id, path_, DU._get_images_in_dir(task_.output_dir))
update_analysis_file_links(tnode_.idx, path_)
