class QCodesDBInspector(QtGui.QMainWindow):
"""
Main window of the inspectr tool.
"""
#: `Signal ()` -- Emitted when when there's an update to the internally
#: cached data (the *data base data frame* :)).
dbdfUpdated = QtCore.pyqtSignal()
#: Signal (`dict`) -- emitted to communicate information about a given
#: run to the widget that displays the information
_sendInfo = QtCore.pyqtSignal(dict)
def __init__(self, parent=None, dbPath=None):
"""Constructor for :class:`QCodesDBInspector`."""
super().__init__(parent)
self._plotWindows = {}
self.filepath = dbPath
self.dbdf = None
self.monitor = QtCore.QTimer()
# flag for determining what has been loaded so far.
# * None: nothing opened yet.
# * -1: empty DS open.
# * any value > 0: run ID from the most recent loading.
self.latestRunId = None
self.setWindowTitle('Plottr | QCoDeS dataset inspectr')
### GUI elements
# Main Selection widgets
self.dateList = DateList()
self.runList = RunList()
self.runInfo = RunInfo()
rightSplitter = QtGui.QSplitter(QtCore.Qt.Vertical)
rightSplitter.addWidget(self.runList)
rightSplitter.addWidget(self.runInfo)
rightSplitter.setSizes([400, 200])
splitter = QtGui.QSplitter()
splitter.addWidget(self.dateList)
splitter.addWidget(rightSplitter)
splitter.setSizes([100, 500])
self.setCentralWidget(splitter)
# status bar
self.status = QtGui.QStatusBar()
self.setStatusBar(self.status)
# toolbar
self.toolbar = self.addToolBar('Data monitoring')
# toolbar item: monitor interval
self.monitorInput = MonitorIntervalInput()
self.monitorInput.setToolTip('Set to 0 for disabling')
self.monitorInput.intervalChanged.connect(self.setMonitorInterval)
self.toolbar.addWidget(self.monitorInput)
self.toolbar.addSeparator()
# toolbar item: auto-launch plotting
self.autoLaunchPlots = FormLayoutWrapper([('Auto-plot new',
QtGui.QCheckBox())])
tt = "If checked, and automatic refresh is running, "
tt += " launch plotting window for new datasets automatically."
self.autoLaunchPlots.setToolTip(tt)
self.toolbar.addWidget(self.autoLaunchPlots)
# menu bar
menu = self.menuBar()
fileMenu = menu.addMenu('&File')
# action: load db file
loadAction = QtGui.QAction('&Load', self)
loadAction.setShortcut('Ctrl+L')
loadAction.triggered.connect(self.loadDB)
fileMenu.addAction(loadAction)
# action: updates from the db file
refreshAction = QtGui.QAction('&Refresh', self)
refreshAction.setShortcut('R')
refreshAction.triggered.connect(self.refreshDB)
fileMenu.addAction(refreshAction)
# sizing
self.resize(640, 640)
### Thread workers
# DB loading. can be slow, so nice to have in a thread.
self.loadDBProcess = LoadDBProcess()
self.loadDBThread = QtCore.QThread()
self.loadDBProcess.moveToThread(self.loadDBThread)
self.loadDBProcess.pathSet.connect(self.loadDBThread.start)
self.loadDBProcess.dbdfLoaded.connect(self.DBLoaded)
self.loadDBProcess.dbdfLoaded.connect(self.loadDBThread.quit)
self.loadDBThread.started.connect(self.loadDBProcess.loadDB)
### connect signals/slots
self.dbdfUpdated.connect(self.updateDates)
self.dbdfUpdated.connect(self.showDBPath)
self.dateList.datesSelected.connect(self.setDateSelection)
self.dateList.fileDropped.connect(self.loadFullDB)
self.runList.runSelected.connect(self.setRunSelection)
self.runList.runActivated.connect(self.plotRun)
self._sendInfo.connect(self.runInfo.setInfo)
self.monitor.timeout.connect(self.monitorTriggered)
if self.filepath is not None:
self.loadFullDB(self.filepath)
def closeEvent(self, event):
"""
When closing the inspectr window, do some house keeping:
* stop the monitor, if running
* close all plot windows
"""
if self.monitor.isActive():
self.monitor.stop()
for runId, info in self._plotWindows.items():
info['window'].close()
@QtCore.pyqtSlot()
def showDBPath(self):
tstamp = time.strftime("%Y-%m-%d %H:%M:%S")
path = os.path.abspath(self.filepath)
self.status.showMessage(f"{path} (loaded: {tstamp})")
### loading the DB and populating the widgets
@QtCore.pyqtSlot()
def loadDB(self):
"""
Open a file dialog that allows selecting a .db file for loading.
If a file is selected, opens the db.
"""
if self.filepath is not None:
curdir = os.path.split(self.filepath)[0]
else:
curdir = os.getcwd()
path, _fltr = QtGui.QFileDialog.getOpenFileName(
self,
'Open qcodes .db file',
curdir,
'qcodes .db files (*.db);;all files (*.*)',
)
if path:
logger().info(f"Opening: {path}")
self.loadFullDB(path=path)
def loadFullDB(self, path=None):
if path is not None and path != self.filepath:
self.filepath = path
# makes sure we treat a newly loaded file fresh and not as a
# refreshed one.
self.latestRunId = None
if self.filepath is not None:
if not self.loadDBThread.isRunning():
self.loadDBProcess.setPath(self.filepath)
def DBLoaded(self, dbdf):
self.dbdf = dbdf
self.dbdfUpdated.emit()
self.dateList.sendSelectedDates()
logger().debug('DB reloaded')
if self.latestRunId is not None:
idxs = self.dbdf.index.values
newIdxs = idxs[idxs > self.latestRunId]
if self.monitor.isActive(
) and self.autoLaunchPlots.elements['Auto-plot new'].isChecked():
for idx in newIdxs:
self.plotRun(idx)
self._plotWindows[idx]['window'].setMonitorInterval(2)
@QtCore.pyqtSlot()
def updateDates(self):
if self.dbdf.size > 0:
dates = list(self.dbdf.groupby('started date').indices.keys())
self.dateList.updateDates(dates)
### reloading the db
@QtCore.pyqtSlot()
def refreshDB(self):
if self.filepath is not None:
if self.dbdf is not None and self.dbdf.size > 0:
self.latestRunId = self.dbdf.index.values.max()
else:
self.latestRunId = -1
self.loadFullDB()
@QtCore.pyqtSlot(int)
def setMonitorInterval(self, val):
self.monitor.stop()
if val > 0:
self.monitor.start(val * 1000)
self.monitorInput.spin.setValue(val)
@QtCore.pyqtSlot()
def monitorTriggered(self):
logger().debug('Refreshing DB')
self.refreshDB()
### handling user selections
@QtCore.pyqtSlot(list)
def setDateSelection(self, dates):
if len(dates) > 0:
selection = self.dbdf.loc[self.dbdf['started date'].isin(
dates)].sort_index(ascending=False)
self.runList.setRuns(selection.to_dict(orient='index'))
else:
self.runList.clear()
@QtCore.pyqtSlot(int)
def setRunSelection(self, runId):
ds = load_dataset_from(self.filepath, runId)
snap = None
if hasattr(ds, 'snapshot'):
snap = ds.snapshot
structure = get_ds_structure(ds)
for k, v in structure.items():
v.pop('values')
contentInfo = {'Data structure': structure, 'QCoDeS Snapshot': snap}
self._sendInfo.emit(contentInfo)
@QtCore.pyqtSlot(int)
def plotRun(self, runId):
fc, win = autoplotQcodesDataset(pathAndId=(self.filepath, runId))
self._plotWindows[runId] = {
'flowchart': fc,
'window': win,
}
win.showTime()
def __init__(self, parent=None, dbPath=None):
"""Constructor for :class:`QCodesDBInspector`."""
super().__init__(parent)
self._plotWindows = {}
self.filepath = dbPath
self.dbdf = None
self.monitor = QtCore.QTimer()
# flag for determining what has been loaded so far.
# * None: nothing opened yet.
# * -1: empty DS open.
# * any value > 0: run ID from the most recent loading.
self.latestRunId = None
self.setWindowTitle('Plottr | QCoDeS dataset inspectr')
### GUI elements
# Main Selection widgets
self.dateList = DateList()
self.runList = RunList()
self.runInfo = RunInfo()
rightSplitter = QtGui.QSplitter(QtCore.Qt.Vertical)
rightSplitter.addWidget(self.runList)
rightSplitter.addWidget(self.runInfo)
rightSplitter.setSizes([400, 200])
splitter = QtGui.QSplitter()
splitter.addWidget(self.dateList)
splitter.addWidget(rightSplitter)
splitter.setSizes([100, 500])
self.setCentralWidget(splitter)
# status bar
self.status = QtGui.QStatusBar()
self.setStatusBar(self.status)
# toolbar
self.toolbar = self.addToolBar('Data monitoring')
# toolbar item: monitor interval
self.monitorInput = MonitorIntervalInput()
self.monitorInput.setToolTip('Set to 0 for disabling')
self.monitorInput.intervalChanged.connect(self.setMonitorInterval)
self.toolbar.addWidget(self.monitorInput)
self.toolbar.addSeparator()
# toolbar item: auto-launch plotting
self.autoLaunchPlots = FormLayoutWrapper([('Auto-plot new',
QtGui.QCheckBox())])
tt = "If checked, and automatic refresh is running, "
tt += " launch plotting window for new datasets automatically."
self.autoLaunchPlots.setToolTip(tt)
self.toolbar.addWidget(self.autoLaunchPlots)
# menu bar
menu = self.menuBar()
fileMenu = menu.addMenu('&File')
# action: load db file
loadAction = QtGui.QAction('&Load', self)
loadAction.setShortcut('Ctrl+L')
loadAction.triggered.connect(self.loadDB)
fileMenu.addAction(loadAction)
# action: updates from the db file
refreshAction = QtGui.QAction('&Refresh', self)
refreshAction.setShortcut('R')
refreshAction.triggered.connect(self.refreshDB)
fileMenu.addAction(refreshAction)
# sizing
self.resize(640, 640)
### Thread workers
# DB loading. can be slow, so nice to have in a thread.
self.loadDBProcess = LoadDBProcess()
self.loadDBThread = QtCore.QThread()
self.loadDBProcess.moveToThread(self.loadDBThread)
self.loadDBProcess.pathSet.connect(self.loadDBThread.start)
self.loadDBProcess.dbdfLoaded.connect(self.DBLoaded)
self.loadDBProcess.dbdfLoaded.connect(self.loadDBThread.quit)
self.loadDBThread.started.connect(self.loadDBProcess.loadDB)
### connect signals/slots
self.dbdfUpdated.connect(self.updateDates)
self.dbdfUpdated.connect(self.showDBPath)
self.dateList.datesSelected.connect(self.setDateSelection)
self.dateList.fileDropped.connect(self.loadFullDB)
self.runList.runSelected.connect(self.setRunSelection)
self.runList.runActivated.connect(self.plotRun)
self._sendInfo.connect(self.runInfo.setInfo)
self.monitor.timeout.connect(self.monitorTriggered)
if self.filepath is not None:
self.loadFullDB(self.filepath)
class QCodesDBInspector(QtWidgets.QMainWindow):
"""
Main window of the inspectr tool.
"""
#: `Signal ()` -- Emitted when when there's an update to the internally
#: cached data (the *data base data frame* :)).
dbdfUpdated = Signal()
#: Signal (`dict`) -- emitted to communicate information about a given
#: run to the widget that displays the information
_sendInfo = Signal(dict)
def __init__(self,
parent: Optional[QtWidgets.QWidget] = None,
dbPath: Optional[str] = None):
"""Constructor for :class:`QCodesDBInspector`."""
super().__init__(parent)
self._plotWindows: Dict[int, WindowDict] = {}
self.filepath = dbPath
self.dbdf: Optional[pandas.DataFrame] = None
self.monitor = QtCore.QTimer()
# flag for determining what has been loaded so far.
# * None: nothing opened yet.
# * -1: empty DS open.
# * any value > 0: run ID from the most recent loading.
self.latestRunId: Optional[int] = None
self.setWindowTitle('Plottr | QCoDeS dataset inspectr')
### GUI elements
# Main Selection widgets
self.dateList = DateList()
self._selected_dates: Tuple[str, ...] = ()
self.runList = RunList()
self.runInfo = RunInfo()
rightSplitter = QtWidgets.QSplitter(QtCore.Qt.Vertical)
rightSplitter.addWidget(self.runList)
rightSplitter.addWidget(self.runInfo)
rightSplitter.setSizes([400, 200])
splitter = QtWidgets.QSplitter()
splitter.addWidget(self.dateList)
splitter.addWidget(rightSplitter)
splitter.setSizes([100, 500])
self.setCentralWidget(splitter)
# status bar
self.status = QtWidgets.QStatusBar()
self.setStatusBar(self.status)
# toolbar
self.toolbar = self.addToolBar('Data monitoring')
# toolbar item: monitor interval
self.monitorInput = MonitorIntervalInput()
self.monitorInput.setToolTip('Set to 0 for disabling')
self.monitorInput.intervalChanged.connect(self.setMonitorInterval)
self.toolbar.addWidget(self.monitorInput)
self.toolbar.addSeparator()
# toolbar item: auto-launch plotting
self.autoLaunchPlots = FormLayoutWrapper([('Auto-plot new',
QtWidgets.QCheckBox())])
tt = "If checked, and automatic refresh is running, "
tt += " launch plotting window for new datasets automatically."
self.autoLaunchPlots.setToolTip(tt)
self.toolbar.addWidget(self.autoLaunchPlots)
self.showOnlyStarAction = self.toolbar.addAction(
RunList.tag_dict['star'])
self.showOnlyStarAction.setToolTip('Show only starred runs')
self.showOnlyStarAction.setCheckable(True)
self.showOnlyStarAction.triggered.connect(self.updateRunList)
self.showAlsoCrossAction = self.toolbar.addAction(
RunList.tag_dict['cross'])
self.showAlsoCrossAction.setToolTip('Show also crossed runs')
self.showAlsoCrossAction.setCheckable(True)
self.showAlsoCrossAction.triggered.connect(self.updateRunList)
# menu bar
menu = self.menuBar()
fileMenu = menu.addMenu('&File')
# action: load db file
loadAction = QtWidgets.QAction('&Load', self)
loadAction.setShortcut('Ctrl+L')
loadAction.triggered.connect(self.loadDB)
fileMenu.addAction(loadAction)
# action: updates from the db file
refreshAction = QtWidgets.QAction('&Refresh', self)
refreshAction.setShortcut('R')
refreshAction.triggered.connect(self.refreshDB)
fileMenu.addAction(refreshAction)
# action: star/unstar the selected run
self.starAction = QtWidgets.QAction()
self.starAction.setShortcut('Ctrl+Alt+S')
self.starAction.triggered.connect(self.starSelectedRun)
self.addAction(self.starAction)
# action: cross/uncross the selected run
self.crossAction = QtWidgets.QAction()
self.crossAction.setShortcut('Ctrl+Alt+X')
self.crossAction.triggered.connect(self.crossSelectedRun)
self.addAction(self.crossAction)
# sizing
scaledSize = 640 * rint(self.logicalDpiX() / 96.0)
self.resize(scaledSize, scaledSize)
### Thread workers
# DB loading. can be slow, so nice to have in a thread.
self.loadDBProcess = LoadDBProcess()
self.loadDBThread = QtCore.QThread()
self.loadDBProcess.moveToThread(self.loadDBThread)
self.loadDBProcess.pathSet.connect(self.loadDBThread.start)
self.loadDBProcess.dbdfLoaded.connect(self.DBLoaded)
self.loadDBProcess.dbdfLoaded.connect(self.loadDBThread.quit)
self.loadDBThread.started.connect(self.loadDBProcess.loadDB)
### connect signals/slots
self.dbdfUpdated.connect(self.updateDates)
self.dbdfUpdated.connect(self.showDBPath)
self.dateList.datesSelected.connect(self.setDateSelection)
self.dateList.fileDropped.connect(self.loadFullDB)
self.runList.runSelected.connect(self.setRunSelection)
self.runList.runActivated.connect(self.plotRun)
self._sendInfo.connect(self.runInfo.setInfo)
self.monitor.timeout.connect(self.monitorTriggered)
if self.filepath is not None:
self.loadFullDB(self.filepath)
def closeEvent(self, event: QtGui.QCloseEvent) -> None:
"""
When closing the inspectr window, do some house keeping:
* stop the monitor, if running
* close all plot windows
"""
if self.monitor.isActive():
self.monitor.stop()
for runId, info in self._plotWindows.items():
info['window'].close()
@Slot()
def showDBPath(self) -> None:
tstamp = time.strftime("%Y-%m-%d %H:%M:%S")
assert self.filepath is not None
path = os.path.abspath(self.filepath)
self.status.showMessage(f"{path} (loaded: {tstamp})")
### loading the DB and populating the widgets
@Slot()
def loadDB(self) -> None:
"""
Open a file dialog that allows selecting a .db file for loading.
If a file is selected, opens the db.
"""
if self.filepath is not None:
curdir = os.path.split(self.filepath)[0]
else:
curdir = os.getcwd()
path, _fltr = QtWidgets.QFileDialog.getOpenFileName(
self,
'Open qcodes .db file',
curdir,
'qcodes .db files (*.db);;all files (*.*)',
)
if path:
logger().info(f"Opening: {path}")
self.loadFullDB(path=path)
def loadFullDB(self, path: Optional[str] = None) -> None:
if path is not None and path != self.filepath:
self.filepath = path
# makes sure we treat a newly loaded file fresh and not as a
# refreshed one.
self.latestRunId = None
if self.filepath is not None:
if not self.loadDBThread.isRunning():
self.loadDBProcess.setPath(self.filepath)
def DBLoaded(self, dbdf: pandas.DataFrame) -> None:
if dbdf.equals(self.dbdf):
logger().debug('DB reloaded with no changes. Skipping update')
return None
self.dbdf = dbdf
self.dbdfUpdated.emit()
self.dateList.sendSelectedDates()
logger().debug('DB reloaded')
if self.latestRunId is not None:
idxs = self.dbdf.index.values
newIdxs = idxs[idxs > self.latestRunId]
if self.monitor.isActive(
) and self.autoLaunchPlots.elements['Auto-plot new'].isChecked():
for idx in newIdxs:
self.plotRun(idx)
self._plotWindows[idx]['window'].setMonitorInterval(
self.monitorInput.spin.value())
@Slot()
def updateDates(self) -> None:
assert self.dbdf is not None
if self.dbdf.size > 0:
dates = list(self.dbdf.groupby('started_date').indices.keys())
self.dateList.updateDates(dates)
### reloading the db
@Slot()
def refreshDB(self) -> None:
if self.filepath is not None:
if self.dbdf is not None and self.dbdf.size > 0:
self.latestRunId = self.dbdf.index.values.max()
else:
self.latestRunId = -1
self.loadFullDB()
@Slot(float)
def setMonitorInterval(self, val: float) -> None:
self.monitor.stop()
if val > 0:
self.monitor.start(int(val * 1000))
self.monitorInput.spin.setValue(val)
@Slot()
def monitorTriggered(self) -> None:
logger().debug('Refreshing DB')
self.refreshDB()
@Slot()
def updateRunList(self) -> None:
if self.dbdf is None:
return
selection = self.dbdf.loc[self.dbdf['started_date'].isin(
self._selected_dates)].sort_index(ascending=False)
show_only_star = self.showOnlyStarAction.isChecked()
show_also_cross = self.showAlsoCrossAction.isChecked()
self.runList.setRuns(selection.to_dict(orient='index'), show_only_star,
show_also_cross)
### handling user selections
@Slot(list)
def setDateSelection(self, dates: Sequence[str]) -> None:
if len(dates) > 0:
assert self.dbdf is not None
selection = self.dbdf.loc[self.dbdf['started_date'].isin(
dates)].sort_index(ascending=False)
old_dates = self._selected_dates
if not all(date in old_dates for date in dates):
show_only_star = self.showOnlyStarAction.isChecked()
show_also_cross = self.showAlsoCrossAction.isChecked()
self.runList.setRuns(selection.to_dict(orient='index'),
show_only_star, show_also_cross)
else:
self.runList.updateRuns(selection.to_dict(orient='index'))
self._selected_dates = tuple(dates)
else:
self._selected_dates = ()
self.runList.clear()
@Slot(int)
def setRunSelection(self, runId: int) -> None:
assert self.filepath is not None
ds = load_dataset_from(self.filepath, runId)
snap = None
if hasattr(ds, 'snapshot'):
snap = ds.snapshot
structure = cast(Dict[str, dict], get_ds_structure(ds))
# cast away typed dict so we can pop a key
for k, v in structure.items():
v.pop('values')
contentInfo = {
'Data structure': structure,
'Metadata': ds.metadata,
'QCoDeS Snapshot': snap
}
self._sendInfo.emit(contentInfo)
@Slot(int)
def plotRun(self, runId: int) -> None:
assert self.filepath is not None
fc, win = autoplotQcodesDataset(pathAndId=(self.filepath, runId))
self._plotWindows[runId] = {
'flowchart': fc,
'window': win,
}
win.showTime()
def setTag(self, item: QtWidgets.QTreeWidgetItem, tag: str) -> None:
# set tag in the database
assert self.filepath is not None
runId = int(item.text(0))
ds = load_dataset_from(self.filepath, runId)
ds.add_metadata('inspectr_tag', tag)
# set tag in self.dbdf
assert self.dbdf is not None
self.dbdf.at[runId, 'inspectr_tag'] = tag
# set tag in the GUI
tag_char = self.runList.tag_dict[tag]
item.setText(1, tag_char)
# refresh the RunInfo widget
self.setRunSelection(runId)
def tagSelectedRun(self, tag: str) -> None:
for item in self.runList.selectedItems():
current_tag_char = item.text(1)
tag_char = self.runList.tag_dict[tag]
if current_tag_char == tag_char: # if already tagged
self.setTag(item, '') # clear tag
else: # if not tagged
self.setTag(item, tag) # set tag
@Slot()
def starSelectedRun(self) -> None:
self.tagSelectedRun('star')
@Slot()
def crossSelectedRun(self) -> None:
self.tagSelectedRun('cross')