def setUp(self):
os.makedirs('/tmp/test_folder')
os.chdir('/tmp/test_folder')
log.setLevel('CRITICAL')
workflow = """
workflow "sample" {
resolves = "sample action"
}
action "sample action" {
uses = "sh"
args = ["echo", "Hello"]
}
"""
pu.write_file('/tmp/test_folder/a.workflow', workflow)
self.wf = Workflow('/tmp/test_folder/a.workflow')
self.wf.parse()
WorkflowRunner.instantiate_runners('docker', self.wf,
'/tmp/test_folder', False, False,
'12345')
def setUp(self):
os.makedirs('/tmp/test_folder')
os.chdir('/tmp/test_folder')
log.setLevel('CRITICAL')
workflow = """
workflow "sample" {
resolves = "sample action"
}
action "sample action" {
uses = "popperized/bin/sh@master"
args = ["echo", "Hello"]
}
"""
pu.write_file('/tmp/test_folder/a.workflow', workflow)
self.wf = Workflow('/tmp/test_folder/a.workflow')
self.wf.parse()
WorkflowRunner.download_actions(self.wf, False, False, '12345')
WorkflowRunner.instantiate_runners('vagrant', self.wf,
'/tmp/test_folder', False, False,
'12345')
self.runner = self.wf.action['sample action']['runner']
VagrantRunner.setup_vagrant_cache('12345')
def test_instantiate_runners(self):
pu.write_file(
'/tmp/test_folder/a.workflow', """
workflow "sample" {
resolves = "a"
}
action "a" {
uses = "sh"
args = "ls"
}
""")
wf = Workflow('/tmp/test_folder/a.workflow')
wf.parse()
env = WorkflowRunner.get_workflow_env(wf, '/tmp/test_folder')
WorkflowRunner.instantiate_runners('docker', wf, '/tmp/test_folder',
False, False, '12345')
self.assertIsInstance(wf.action['a']['runner'], HostRunner)
os.makedirs('/tmp/test_folder/actions/sample')
pu.write_file('/tmp/test_folder/actions/sample/entrypoint.sh')
pu.write_file('/tmp/test_folder/actions/sample/README.md')
pu.write_file(
'/tmp/test_folder/a.workflow', """
workflow "sample" {
resolves = "a"
}
action "a" {
uses = "./actions/sample"
}
""")
wf = Workflow('/tmp/test_folder/a.workflow')
wf.parse()
env = WorkflowRunner.get_workflow_env(wf, '/tmp/test_folder')
WorkflowRunner.instantiate_runners('singularity', wf,
'/tmp/test_folder', False, False,
'12345')
self.assertIsInstance(wf.action['a']['runner'], HostRunner)
pu.write_file(
'/tmp/test_folder/a.workflow', """
workflow "sample" {
resolves = "a"
}
action "a" {
uses = "popperized/bin/sh@master"
}
""")
wf = Workflow('/tmp/test_folder/a.workflow')
wf.parse()
env = WorkflowRunner.get_workflow_env(wf, '/tmp/test_folder')
WorkflowRunner.instantiate_runners('singularity', wf,
'/tmp/test_folder', False, False,
'12345')
self.assertIsInstance(wf.action['a']['runner'], SingularityRunner)
WorkflowRunner.instantiate_runners('docker', wf, '/tmp/test_folder',
False, False, '12345')
self.assertIsInstance(wf.action['a']['runner'], DockerRunner)
WorkflowRunner.instantiate_runners('vagrant', wf, '/tmp/test_folder',
False, False, '12345')
self.assertIsInstance(wf.action['a']['runner'], VagrantRunner)