def __init__(self, topLevelOperatorView):
super(PreprocessingGui, self).__init__()
self.drawer = None
self.threadRouter = ThreadRouter(self)
self.guiMode = 1
self.topLevelOperatorView = topLevelOperatorView
self.initAppletDrawerUic()
self.centralGui = PreprocessingViewerGui(self.topLevelOperatorView)
def __init__(self, topLevelOperatorView):
super(PreprocessingGui,self).__init__()
self.drawer = None
self.threadRouter = ThreadRouter(self)
self.guiMode = 1
self.topLevelOperatorView = topLevelOperatorView
self.initAppletDrawerUic()
self.centralGui = PreprocessingViewerGui(self.topLevelOperatorView)
class PreprocessingGui(QMainWindow):
def __init__(self, topLevelOperatorView):
super(PreprocessingGui, self).__init__()
self.drawer = None
self.threadRouter = ThreadRouter(self)
self.guiMode = 1
self.topLevelOperatorView = topLevelOperatorView
self.initAppletDrawerUic()
self.centralGui = PreprocessingViewerGui(self.topLevelOperatorView)
def initAppletDrawerUic(self):
"""
Load the ui file for the applet drawer, which we own.
"""
# Load the ui file (find it in our own directory)
localDir = os.path.split(__file__)[0] + '/'
# (We don't pass self here because we keep the drawer ui in a separate object.)
self.drawer = uic.loadUi(localDir + "/preprocessingDrawer.ui")
# FIXME: for 0.6, we do not want to allow these options below
self.drawer.watershedSourceCombo.hide()
self.drawer.invertWatershedSourceCheckbox.hide()
self.drawer.watershedSourceInputLabel.hide()
# Set up radiobox layout
self.filterbuttons = [
self.drawer.filter1, self.drawer.filter2, self.drawer.filter3,
self.drawer.filter4, self.drawer.filter5
]
self.filterbuttons[self.topLevelOperatorView.Filter.value].setChecked(
True)
self.correspondingSigmaMins = [0.9, 0.9, 0.6, 0.1, 0.1]
# Set up our handlers
for f in self.filterbuttons:
f.clicked.connect(self.handleFilterChanged)
self.drawer.runButton.clicked.connect(self.handleRunButtonClicked)
self.drawer.runButton.setIcon(QIcon(ilastikIcons.Play))
self.drawer.sigmaSpin.setValue(self.topLevelOperatorView.Sigma.value)
self.drawer.sigmaSpin.valueChanged.connect(
self.handleSigmaValueChanged)
self.drawer.watershedSourceCombo.addItem("Input Data",
userData="input")
self.drawer.watershedSourceCombo.addItem("Filter Output",
userData="filtered")
self.drawer.watershedSourceCombo.addItem("Raw Data (if available)",
userData="raw")
sourceSetting = self.topLevelOperatorView.WatershedSource.value
comboIndex = self.drawer.watershedSourceCombo.findData(sourceSetting)
self.drawer.watershedSourceCombo.setCurrentIndex(comboIndex)
self.drawer.watershedSourceCombo.currentIndexChanged.connect(
self.handleWatershedSourceChange)
self.drawer.invertWatershedSourceCheckbox.setChecked(
self.topLevelOperatorView.InvertWatershedSource.value)
self.drawer.invertWatershedSourceCheckbox.toggled.connect(
self.handleInvertWatershedSourceChange)
#FIXME: for release 0.6, disable this (the reset button made the gui even more complicated)
#self.drawer.resetButton.clicked.connect(self.topLevelOperatorView.reset)
self.drawer.writeprotectBox.stateChanged.connect(
self.handleWriterprotectStateChanged)
def handleFilterChanged(self):
choice = [f.isChecked() for f in self.filterbuttons].index(True)
self.topLevelOperatorView.Filter.setValue(choice)
#update lower bound for sigma
self.drawer.sigmaSpin.setMinimum(self.correspondingSigmaMins[choice])
def handleSigmaValueChanged(self):
self.topLevelOperatorView.Sigma.setValue(self.drawer.sigmaSpin.value())
def handleWatershedSourceChange(self, index):
data = self.drawer.watershedSourceCombo.itemData(index).toString()
self.topLevelOperatorView.WatershedSource.setValue(str(data))
def handleInvertWatershedSourceChange(self, checked):
self.topLevelOperatorView.InvertWatershedSource.setValue(checked)
@threadRouted
def onFailed(self, exception, exc_info):
traceback.print_tb(exc_info[2])
QMessageBox.critical(self, "error", str(exception))
def handleRunButtonClicked(self):
self.setWriteprotect()
r = self.topLevelOperatorView.PreprocessedData[:]
r.notify_failed(self.onFailed)
r.submit()
def handleWriterprotectStateChanged(self):
iswriteprotect = self.drawer.writeprotectBox.checkState()
for f in self.filterbuttons:
f.setEnabled(not iswriteprotect)
self.drawer.sigmaSpin.setEnabled(not iswriteprotect)
self.drawer.watershedSourceCombo.setEnabled(not iswriteprotect)
self.drawer.invertWatershedSourceCheckbox.setEnabled(
not iswriteprotect)
self.drawer.runButton.setEnabled(not iswriteprotect)
def enableWriteprotect(self, ew):
self.drawer.writeprotectBox.setEnabled(ew)
def setWriteprotect(self):
self.drawer.writeprotectBox.setChecked(True)
def setFilter(self, s, propagate=False):
self.filterbuttons[s].setChecked(True)
self.handleFilterChanged()
def setSigma(self, sigma):
self.drawer.sigmaSpin.setValue(sigma)
def enableReset(self, er):
pass
#TODO: re-enable this after the 0.6 release
#self.drawer.resetButton.setEnabled(er)
def centralWidget(self):
return self.centralGui
def appletDrawer(self):
return self.drawer
def menus(self):
return []
def viewerControlWidget(self):
return self.centralGui.viewerControlWidget()
def setImageIndex(self, imageIndex):
pass
def imageLaneAdded(self, imageIndex):
pass
def imageLaneRemoved(self, laneIndex, finalLength):
pass
def stopAndCleanUp(self):
self.centralGui.stopAndCleanUp()
class PreprocessingGui(QMainWindow):
def __init__(self, topLevelOperatorView):
super(PreprocessingGui,self).__init__()
self.drawer = None
self.threadRouter = ThreadRouter(self)
self.guiMode = 1
self.topLevelOperatorView = topLevelOperatorView
self.initAppletDrawerUic()
self.centralGui = PreprocessingViewerGui(self.topLevelOperatorView)
def initAppletDrawerUic(self):
"""
Load the ui file for the applet drawer, which we own.
"""
with Tracer(traceLogger):
# Load the ui file (find it in our own directory)
localDir = os.path.split(__file__)[0]+'/'
# (We don't pass self here because we keep the drawer ui in a separate object.)
self.drawer = uic.loadUi(localDir+"/preprocessingDrawer.ui")
# Set up radiobox layout
self.filterbuttons = [self.drawer.filter1,
self.drawer.filter2,
self.drawer.filter3,
self.drawer.filter4,
self.drawer.filter5]
self.filterbuttons[self.topLevelOperatorView.Filter.value].setChecked(True)
self.correspondingSigmaMins = [0.9,0.9,0.6,-float("infinity"),-float("infinity")]
# Set up our handlers
for f in self.filterbuttons:
f.clicked.connect(self.handleFilterChanged)
self.drawer.runButton.clicked.connect(self.handleRunButtonClicked)
self.drawer.runButton.setIcon( QIcon(ilastikIcons.Play) )
self.drawer.sigmaSpin.setValue(self.topLevelOperatorView.Sigma.value)
self.drawer.sigmaSpin.valueChanged.connect(self.handleSigmaValueChanged)
self.drawer.resetButton.clicked.connect(self.topLevelOperatorView.reset)
self.drawer.writeprotectBox.stateChanged.connect(self.handleWriterprotectStateChanged)
def handleFilterChanged(self):
choice = [f.isChecked() for f in self.filterbuttons].index(True)
self.topLevelOperatorView.Filter.setValue(choice)
#update lower bound for sigma
self.drawer.sigmaSpin.setMinimum(self.correspondingSigmaMins[choice])
def handleSigmaValueChanged(self):
self.topLevelOperatorView.Sigma.setValue(self.drawer.sigmaSpin.value())
@threadRouted
def onFailed(self, exception, exc_info):
import traceback
traceback.print_tb(exc_info[2])
QMessageBox.critical(self, "error", str(exception))
def handleRunButtonClicked(self):
self.setWriteprotect()
r = self.topLevelOperatorView.PreprocessedData[:]
r.notify_failed(self.onFailed)
r.submit()
def handleWriterprotectStateChanged(self):
iswriteprotect = self.drawer.writeprotectBox.checkState()
for f in self.filterbuttons:
f.setEnabled(not iswriteprotect)
self.drawer.sigmaSpin.setEnabled(not iswriteprotect)
self.drawer.runButton.setEnabled(not iswriteprotect)
def enableWriteprotect(self,ew):
self.drawer.writeprotectBox.setEnabled(ew)
def setWriteprotect(self):
self.drawer.writeprotectBox.setChecked(True)
def setFilter(self,s,propagate = False):
self.filterbuttons[s].setChecked(True)
self.handleFilterChanged()
def setSigma(self,sigma):
self.drawer.sigmaSpin.setValue(sigma)
def enableReset(self,er):
self.drawer.resetButton.setEnabled(er)
def centralWidget( self ):
return self.centralGui
def appletDrawer( self ):
return self.drawer
def menus( self ):
return []
def viewerControlWidget(self):
return self.centralGui.viewerControlWidget()
def setImageIndex(self,imageIndex):
pass
def imageLaneAdded(self,imageIndex):
pass
def imageLaneRemoved(self,laneIndex,finalLength):
pass
def stopAndCleanUp(self):
self.centralGui.stopAndCleanUp()
class PreprocessingGui(QMainWindow):
def __init__(self, parentApplet, topLevelOperatorView):
super(PreprocessingGui,self).__init__()
self.parentApplet = parentApplet
self.drawer = None
self.threadRouter = ThreadRouter(self)
self.guiMode = 1
self.topLevelOperatorView = topLevelOperatorView
self.initAppletDrawerUic()
self.centralGui = PreprocessingViewerGui(parentApplet, self.topLevelOperatorView)
def initAppletDrawerUic(self):
"""
Load the ui file for the applet drawer, which we own.
"""
# Load the ui file (find it in our own directory)
localDir = os.path.split(__file__)[0]+'/'
# (We don't pass self here because we keep the drawer ui in a separate object.)
self.drawer = uic.loadUi(localDir+"/preprocessingDrawer.ui")
# FIXME: for 0.6, we do not want to allow these options below
self.drawer.watershedSourceCombo.hide()
self.drawer.invertWatershedSourceCheckbox.hide()
self.drawer.watershedSourceInputLabel.hide()
# Set up radiobox layout
self.filterbuttons = [self.drawer.filter1,
self.drawer.filter2,
self.drawer.filter3,
self.drawer.filter4,
self.drawer.filter5]
self.filterbuttons[self.topLevelOperatorView.Filter.value].setChecked(True)
self.correspondingSigmaMins = [0.9,0.9,0.6,0.1,0.1]
# Set up our handlers
for f in self.filterbuttons:
f.clicked.connect(self.handleFilterChanged)
self.drawer.runButton.clicked.connect(self.handleRunButtonClicked)
self.drawer.runButton.setIcon( QIcon(ilastikIcons.Play) )
self.drawer.sigmaSpin.setValue(self.topLevelOperatorView.Sigma.value)
self.drawer.sigmaSpin.valueChanged.connect(self.handleSigmaValueChanged)
self.drawer.watershedSourceCombo.addItem("Input Data", userData="input")
self.drawer.watershedSourceCombo.addItem("Filter Output", userData="filtered")
self.drawer.watershedSourceCombo.addItem("Raw Data (if available)", userData="raw")
sourceSetting = self.topLevelOperatorView.WatershedSource.value
comboIndex = self.drawer.watershedSourceCombo.findData( sourceSetting )
self.drawer.watershedSourceCombo.setCurrentIndex( comboIndex )
self.drawer.watershedSourceCombo.currentIndexChanged.connect( self.handleWatershedSourceChange )
self.drawer.invertWatershedSourceCheckbox.setChecked( self.topLevelOperatorView.InvertWatershedSource.value )
self.drawer.invertWatershedSourceCheckbox.toggled.connect( self.handleInvertWatershedSourceChange )
#FIXME: for release 0.6, disable this (the reset button made the gui even more complicated)
#self.drawer.resetButton.clicked.connect(self.topLevelOperatorView.reset)
self.drawer.writeprotectBox.stateChanged.connect(self.handleWriterprotectStateChanged)
def handleFilterChanged(self):
choice = [f.isChecked() for f in self.filterbuttons].index(True)
self.topLevelOperatorView.Filter.setValue(choice)
#update lower bound for sigma
self.drawer.sigmaSpin.setMinimum(self.correspondingSigmaMins[choice])
def handleSigmaValueChanged(self):
self.topLevelOperatorView.Sigma.setValue(self.drawer.sigmaSpin.value())
def handleWatershedSourceChange(self, index):
data = self.drawer.watershedSourceCombo.itemData(index).toString()
self.topLevelOperatorView.WatershedSource.setValue( str(data) )
def handleInvertWatershedSourceChange(self, checked):
self.topLevelOperatorView.InvertWatershedSource.setValue( checked )
@threadRouted
def onFailed(self, exception, exc_info):
traceback.print_tb(exc_info[2])
QMessageBox.critical(self, "error", str(exception))
def handleRunButtonClicked(self):
self.setWriteprotect()
r = self.topLevelOperatorView.PreprocessedData[:]
r.notify_failed(self.onFailed)
r.notify_finished( bind(self.parentApplet.appletStateUpdateRequested.emit) )
r.submit()
def handleWriterprotectStateChanged(self):
iswriteprotect = self.drawer.writeprotectBox.checkState()
for f in self.filterbuttons:
f.setEnabled(not iswriteprotect)
self.drawer.sigmaSpin.setEnabled(not iswriteprotect)
self.drawer.watershedSourceCombo.setEnabled(not iswriteprotect)
self.drawer.invertWatershedSourceCheckbox.setEnabled( not iswriteprotect )
self.drawer.runButton.setEnabled(not iswriteprotect)
def enableWriteprotect(self,ew):
self.drawer.writeprotectBox.setEnabled(ew)
def setWriteprotect(self):
self.drawer.writeprotectBox.setChecked(True)
def setFilter(self,s,propagate = False):
self.filterbuttons[s].setChecked(True)
self.handleFilterChanged()
def setSigma(self,sigma):
self.drawer.sigmaSpin.setValue(sigma)
def enableReset(self,er):
pass
#TODO: re-enable this after the 0.6 release
#self.drawer.resetButton.setEnabled(er)
def centralWidget( self ):
return self.centralGui
def appletDrawer( self ):
return self.drawer
def menus( self ):
return []
def viewerControlWidget(self):
return self.centralGui.viewerControlWidget()
def setImageIndex(self,imageIndex):
pass
def imageLaneAdded(self,imageIndex):
pass
def imageLaneRemoved(self,laneIndex,finalLength):
pass
def stopAndCleanUp(self):
self.centralGui.stopAndCleanUp()