def test_condense(self):
self.assertEqual(SequenceRange.condense(self.range_12, self.range_24),
[SequenceRange('0', 1, 4)])
self.assertEqual(
SequenceRange.condense(self.range_12, self.range_24,
self.range_56),
[SequenceRange('0', 1, 4), self.range_56])
def test_condense(self):
self.assertEqual(
SequenceRange.condense(
self.range_12,
self.range_24),
[SequenceRange('0', 1, 4)])
self.assertEqual(
SequenceRange.condense(
self.range_12,
self.range_24,
self.range_56),
[SequenceRange('0', 1, 4),
self.range_56])
def transcript_range(self, start, end):
"""Return a list of SequenceRange objects representing the genomic
location(s) of the transcript from `start` to `end`.
More than one SequenceRange is returned if the requested range crosses
exon boundaries.
The `start` and `end` variables are 1-based left-inclusive,
right-exclusive.
"""
ranges = [self.nucleotide_index(i) for i in range(start, end)]
return SequenceRange.condense(*ranges)