def list_to_pathway_names(listname):
if listname == 'all':
pathway_names = [f[:-4] for f in listdir(pathways_dir()) if f.endswith('.txt')]
else:
listfile = join(pathway_lists_dir(),listname)
with open(listfile) as f:
lines = f.readlines()
pathway_names = [x.strip() for x in lines] # remove newlines
pathway_names = [x for x in pathway_names if x] # rmeove empty strings
return pathway_names
def all_pathway_lists():
d = pathway_lists_dir()
def is_ok(listname): return isfile(join(d,listname))
return [x for x in listdir(d) if is_ok(x)]