Python DownStreamHYPHY.test_gene_species_match Exemples

Exemple #1

Fichier : mouse1006.py Projet : zerodel/python-rna-structure

def test_aln():
    aln_path = "/home/zerodel/Workspace/mouse/mouse_8_species"
    given_genes = "macaque,chimp,human,dog,cow,horse,rat,mouse".split(",")
    dsh.test_gene_species_match(aln_path, given_genes)

Exemple #2

Fichier : 0930fly.py Projet : zerodel/python-rna-structure

def test_aln():
    aln_path = "/home/zerodel/Workspace/Fly/align_fly/fly_12_species"
    given_genes = "dyak,dere,dpse,dper,dgri,dmoj,dvir,dwil,dana,dsec,dsim,dmel".split(
        ",")
    dsh.test_gene_species_match(aln_path, given_genes)

Exemple #3

Fichier : mouse1006.py Projet : zerodel/python-rna-structure

def test_aln():
    aln_path = "/home/zerodel/Workspace/mouse/mouse_8_species"
    given_genes = "macaque,chimp,human,dog,cow,horse,rat,mouse".split(",")
    dsh.test_gene_species_match(aln_path, given_genes)

Exemple #4

Fichier : 0930fly.py Projet : zerodel/python-rna-structure

def test_aln():
    aln_path = "/home/zerodel/Workspace/Fly/align_fly/fly_12_species"
    given_genes = "dyak,dere,dpse,dper,dgri,dmoj,dvir,dwil,dana,dsec,dsim,dmel".split(",")
    dsh.test_gene_species_match(aln_path, given_genes)